MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-460A15
Chromosome	X (Build37)
Map Location	160,372,751 - 160,556,969
singlet/doublet	doublet
Overlap gene	Zrsr2, Car5b, Siah1b, Tmem27
Upstream gene	Ctps2, S100g, LOC100040610, EG637051, Grpr, 1700045I19Rik, Ap1s2
Downstream gene	Ace2, Bmx, Pir, Figf, Piga, Asb11, Asb9, Mospd2, Fancb, LOC627045
Link	Open Mouse BAC browser

Click to get alignment info.

name	Ctps2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:55936 MGI:1933185
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	S100g (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12309 MGI:104528
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040610 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040610
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	EG637051 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:637051 MGI:3645878
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	Grpr (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14829 MGI:95836
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700045I19Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74264 MGI:1921514
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA pseudo : _no_value

name	Ap1s2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108012 MGI:1889383
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zrsr2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22184 MGI:103287
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Car5b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56078 MGI:1926249
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Siah1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20438 MGI:108063
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmem27 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:57394 MGI:1926234
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ace2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70008 MGI:1917258
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bmx (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12169 MGI:1101778
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pir (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69656 MGI:1916906
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Figf (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14205 MGI:108037
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Piga (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18700 MGI:99461
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Asb11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68854 MGI:1916104
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Asb9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69299 MGI:1916549
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mospd2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76763 MGI:1924013
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fancb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:237211 MGI:2448558
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC627045 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:627045
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Ctps2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142377114 GeneID:55936 MGI:1933185
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytidine 5'-triphosphate synthase 2 transcript_id : NM_018737.3

name	S100g (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83816950 GeneID:12309 MGI:104528
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : S100 calcium binding protein G transcript_id : NM_009789.2

name	Grpr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130941 GeneID:14829 MGI:95836
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gastrin releasing peptide receptor transcript_id : NM_008177.2

name	Ap1s2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254483 GeneID:108012 MGI:1889383
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : adaptor-related protein complex 1, sigma 2 subunit transcript_id : NM_026887.2

name	Zrsr2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:121949799 GeneID:22184 MGI:103287
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2 transcript_id : NM_009453.2

name	Zrsr2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:121949774 GeneID:22184 MGI:103287
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2 transcript_id : NM_178794.3

name	Car5b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:9506462 GeneID:56078 MGI:1926249
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : carbonic anhydrase 5b, mitochondrial transcript_id : NM_019513.1

name	Car5b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144227235 GeneID:56078 MGI:1926249
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : carbonic anhydrase 5b, mitochondrial transcript_id : NM_181315.3

name	Siah1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6677948 GeneID:20438 MGI:108063
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : seven in absentia 1B transcript_id : NM_009173.1

name	Tmem27 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892354 GeneID:57394 MGI:1926234
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 27 transcript_id : NM_020626.2

name	Ace2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142389001 GeneID:70008 MGI:1917258
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : angiotensin I converting enzyme (peptidyl-dipeptidase A) 2 transcript_id : NM_027286.3

name	Bmx (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802105 GeneID:12169 MGI:1101778
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : BMX non-receptor tyrosine kinase transcript_id : NM_009759.3

name	Pir (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130337 GeneID:69656 MGI:1916906
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pirin transcript_id : NM_027153.2

name	Figf (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6753873 GeneID:14205 MGI:108037
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : c-fos induced growth factor transcript_id : NM_010216.1

name	Piga (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126273665 GeneID:18700 MGI:99461
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphatidylinositol glycan anchor biosynthesis, class A transcript_id : NM_011081.2

name	Asb11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:17105325 GeneID:68854 MGI:1916104
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin repeat and SOCS box-containing protein 11 transcript_id : NM_026853.1

name	Asb9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142373912 GeneID:69299 MGI:1916549
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin repeat and SOCS box-containing protein 9 transcript_id : NM_027027.2

name	Mospd2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142356338 GeneID:76763 MGI:1924013
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : motile sperm domain containing 2 transcript_id : NM_029730.2

name	Fancb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:54020736 GeneID:237211 MGI:2448558
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Fanconi anemia, complementation group B transcript_id : NM_175027.3

name	Ctps2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9055198 GeneID:55936 MGI:1933185
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0016874 - ligase activity [Evidence IEA] GO_process : GO:0006541 - glutamine metabolism [Evidence IEA] codon_start : 1 note : CTP synthetase homolog product : cytidine triphosphate synthase II protein_id : NP_061207.1

name	S100g (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7106263 GeneID:12309 MGI:104528
definition	GO_component : GO:0016324 - apical plasma membrane [Evidence IDA]; GO:0016323 - basolateral plasma membrane [Evidence IDA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005499 - vitamin D binding [Evidence IEA] codon_start : 1 note : calbindin-D9K; calbindin 3, (vitamin D-dependent calcium binding protein); calbindin D9k; calbindin-D9K major form; cytidine 5'-triphosphate synthase 2 product : S100 calcium binding protein G protein_id : NP_033919.1

name	Grpr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680111 CCDS:CCDS30512.1 GeneID:14829 MGI:95836
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004946 - bombesin receptor activity [Evidence TAS]; GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0042127 - regulation of cell proliferation [Evidence IMP]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : bombesin receptor product : gastrin releasing peptide receptor protein_id : NP_032203.1

name	Ap1s2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254484 CCDS:CCDS30514.1 GeneID:108012 MGI:1889383
definition	GO_component : GO:0030121 - AP-1 adaptor complex [Evidence ISS]; GO:0030662 - coated vesicle membrane [Evidence IEA]; GO:0005802 - Golgi trans face [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence ISS]; GO:0008565 - protein transporter activity [Evidence ISS] GO_process : GO:0006897 - endocytosis [Evidence IEA]; GO:0006886 - intracellular protein transport [Evidence IEA] [Evidence ISS]; GO:0015031 - protein transport [Evidence IEA]; GO:0006898 - receptor mediated endocytosis [Evidence ISS]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : adaptor-related protein complex 1 sigma 2 subunit protein_id : NP_081163.2

name	Zrsr2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:121949800 GeneID:22184 MGI:103287
definition	GO_component : GO:0005689 - minor (U12-dependent) spliceosome complex [Evidence ISS]; GO:0005730 - nucleolus [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008380 - RNA splicing [Evidence ISS] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; U2 small nuclear ribonucleoprotein auxiliary factor (U2AF), 35 kDa, related sequence 2; U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1, related sequence 2 product : U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1, related sequence 2 isoform 1 protein_id : NP_033479.2

name	Zrsr2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:121949775 GeneID:22184 MGI:103287
definition	GO_component : GO:0005689 - minor (U12-dependent) spliceosome complex [Evidence ISS]; GO:0005730 - nucleolus [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008380 - RNA splicing [Evidence ISS] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; U2 small nuclear ribonucleoprotein auxiliary factor (U2AF), 35 kDa, related sequence 2; U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1, related sequence 2 product : U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1, related sequence 2 isoform 2 protein_id : NP_848909.2

name	Car5b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9506463 CCDS:CCDS30515.1 GeneID:56078 MGI:1926249
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0004089 - carbonate dehydratase activity [Evidence IDA] [Evidence IEA]; GO:0016829 - lyase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006730 - one-carbon compound metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation note : carbonic anhydrase VB product : carbonic anhydrase 5b, mitochondrial protein_id : NP_062386.1

name	Car5b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31044449 CCDS:CCDS30515.1 GeneID:56078 MGI:1926249
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0004089 - carbonate dehydratase activity [Evidence IDA] [Evidence IEA]; GO:0016829 - lyase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006730 - one-carbon compound metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation note : carbonic anhydrase VB product : carbonic anhydrase 5b, mitochondrial protein_id : NP_851832.1

name	Siah1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677949 CCDS:CCDS30516.1 GeneID:20438 MGI:108063
definition	GO_function : GO:0016874 - ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0004842 - ubiquitin-protein ligase activity [Evidence TAS]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 product : seven in absentia 1B protein_id : NP_033199.1

name	Tmem27 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10181182 CCDS:CCDS30517.1 GeneID:57394 MGI:1926234
definition	GO_component : GO:0016020 - membrane [Evidence IEA] codon_start : 1 note : kidney-specific membrane protein product : transmembrane protein 27 protein_id : NP_065651.1

name	Ace2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83582782 CCDS:CCDS30518.1 GeneID:70008 MGI:1917258
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] GO_function : GO:0004180 - carboxypeptidase activity [Evidence TAS]; GO:0031404 - chloride ion binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : angiotensin I converting enzyme (peptidyl-dipeptidase A) 2 protein_id : NP_081562.2

name	Bmx (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753196 CCDS:CCDS30519.1 GeneID:12169 MGI:1101778
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : TYRO8 protein tyrosine kinase 8 product : BMX non-receptor tyrosine kinase protein_id : NP_033889.1

name	Pir (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51317401 CCDS:CCDS30520.1 GeneID:69656 MGI:1916906
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA] codon_start : 1 note : iron-binding nuclear protein product : pirin protein_id : NP_081429.1

name	Figf (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753874 CCDS:CCDS30521.1 GeneID:14205 MGI:108037
definition	GO_component : GO:0005576 - extracellular region [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008083 - growth factor activity [Evidence IDA] [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0005172 - vascular endothelial growth factor receptor binding [Evidence TAS] GO_process : GO:0001525 - angiogenesis [Evidence IEA]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0008283 - cell proliferation [Evidence IDA]; GO:0007275 - development [Evidence IEA]; GO:0000074 - regulation of progression through cell cycle [Evidence IEA] codon_start : 1 product : c-fos induced growth factor protein_id : NP_034346.1

name	Piga (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:126273666 CCDS:CCDS30522.1 GeneID:18700 MGI:99461
definition	EC_number : 2.4.1.198 GO_component : GO:0005789 - endoplasmic reticulum membrane [Evidence ISS]; GO:0000506 - glycosylphosphatidylinositol-N- acetylglucosaminyltransferase (GPI-GnT) complex [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0017176 - phosphatidylinositol N-acetylglucosaminyltransferase activity [Evidence ISS]; GO:0005515 - protein binding [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006506 - GPI anchor biosynthesis [Evidence ISS] [Evidence IEA]; GO:0009893 - positive regulation of metabolism [Evidence ISS] codon_start : 1 note : phosphatidylinositolglycan class A product : phosphatidylinositol glycan, class A protein_id : NP_035211.2

name	Asb11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:17105326 CCDS:CCDS30523.1 GeneID:68854 MGI:1916104
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] codon_start : 1 product : ankyrin repeat and SOCS box-containing protein 11 protein_id : NP_081129.1

name	Asb9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21311897 CCDS:CCDS30524.1 GeneID:69299 MGI:1916549
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA] codon_start : 1 product : ankyrin repeat and SOCS box-containing protein 9 protein_id : NP_081303.1

name	Mospd2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110626072 GeneID:76763 MGI:1924013
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : motile sperm domain containing 2 protein_id : NP_084006.1

name	Fancb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:54020737 GeneID:237211 MGI:2448558
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0006281 - DNA repair [Evidence IEA]; GO:0006974 - response to DNA damage stimulus [Evidence IEA] codon_start : 1 product : Fanconi anemia, complementation group B protein_id : NP_778192.2

name	LOC100040610 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040610
definition	number : 1 pseudo : _no_value

name	EG637051 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:637051
definition	number : 1 pseudo : _no_value

name	LOC627045 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:627045
definition	number : 1 pseudo : _no_value

name	LOC627045 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:627045
definition	number : 2 pseudo : _no_value

name	LOC627045 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:627045
definition	number : 3 pseudo : _no_value

name	LOC627045 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:627045
definition	number : 4 pseudo : _no_value

name	1700045I19Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149272401 GeneID:74264 MGI:1921514
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700045I19 gene pseudo : _no_value transcript_id : XR_035172.1

clone name	MSMg01-362P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-151P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444L04
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-357I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125B12
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-275I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-301D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-102P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460A15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-198G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-048E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-202J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-067C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-070A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104K10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064E16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329N16
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-460A15.T7 (MSMg01no460_a15.b1)	MSMg01-460A15.TJ (MSMg01no460_a15.g1)
ACC	AG545490	AG545491
length	720	720
length of high quality (start - end)	625 (61 - 685)	410 (68 - 477)
definition	CHROMAT_FILE: MSMg01no460_a15.b1 PHD_FILE: MSMg01no460_a15.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:33:11 2005	CHROMAT_FILE: MSMg01no460_a15.g1 PHD_FILE: MSMg01no460_a15.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:33:11 2005
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(160,556,345 - 160,556,969)	(160,372,751 - 160,373,160)
sequence	XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCAG GTTTCCCAGAGCTATTACACAGAGAAACTCTGTCTCGAAAACAAAACAAA ACAAAATGGATGTACACCATAAGAGTAACATCCATTTCCAGGGCTGTAGA TGAAATTAAATATAACTAATAAAGTTAAACTCACTATGTTCCACCTTGTG AAAATGTCTAAAAGCGTAGTCAGCCATACAATCAAAATGAGATGATCACT ACTTTATTAAATCAGCATAGGTAGGATGTGTACAAATTGCAGGCAACAAC AAATATATCTGCTTGCCCTACTAAAGACTAATATGCAGAAACTATACAAG CAACTGTTGGTGTGATAACAGAATAAAATTCCCTTGCCATTTTTATCCAT CTCTTGTTTAATTTTCCTCGATGCATCATATACAGAGTAATATAAACAGT ATTCAAAAAGATCCATTTTTAATGATTTCTATGCCATGTTATAGCCATTC TCCAGTGAAAATTTTTTTCTTAGGTCTTCAAAATATGAAATATAGTTACA GCCCTGACTTTATTTCTAGAAATGCTCAAATCAGTAACTACAAACACACA CTATACCTACATAATCAGTTATCAAAAAGAAAATTCTAGAATATTTTGAG AAGCTAACACCTTATGATTTCATTGGTCTTTGTGGATATAATTTGTTGTC AATCACATTCAAGCATCTTA	GTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXCCAAATGTCAGATTGCTAAGTGCCATGTGACAG TGAGCTTGGAGGCCCAAAGCCTGACAATGAACGTCTGCGAAGAAAGCGTC TCAGGAAAGCTGGGATAATGGCCACGAGCCGAGCCGGTAGCGACCACATT CACTGATGATCACTCTTGTGCTGGTTACATACACAAGGACTGGGTTTAAC ACTGGATGTACTCAACACTGACAACTCTAATTTCCTGGGAAATGACAAAA TCCTTTACCTCTTTATAAAAAACTTTCACAACACACTATTCAAGATATAC CCTGGCAGCCCCCAGGGGAAGGAGGAACTCTAAGAGATGGGGAAAGAGAA GTATGGAAATGGTACTTCTAAATTTTGAAATGGGATGTTATAGAGAAAAA AAAATCTACTTTTACATATAGAAAAATAAAATAGAATATTTTAAAAGAAA TTGGCCAGAAAGTAGAAAAAATTAGTGATAATAAAAACCTTCACTTCAAT ACCTAAATCCTGCCAAAGTAGCAAAGCTGAAAATTCTTATTCTGTGCTGT GAATGCTAAAACGTTATAATGATGCTTGGAGTCTTCCTGTGAGGAAACCT GTATTACCTTTCTTGAATTAGTTTAATCTACTAAATTTTAGGGCCACCTT TTATAATCCACTTTTAAGAC
quality values	Open. Hide. 32 37 37 37 37 37 30 29 32 23 15 10 10 10 25 25 37 27 18 17 15 8 6 6 6 6 6 6 9 9 9 9 9 10 9 11 10 17 25 36 59 30 26 26 30 30 25 19 19 9 9 9 12 12 14 14 11 11 10 11 11 18 26 31 47 33 33 33 33 33 33 37 37 59 37 35 28 32 32 33 33 42 50 59 59 59 59 59 57 50 53 50 50 50 50 50 50 50 50 50 50 50 48 48 47 53 50 48 43 43 43 42 42 42 48 50 50 53 53 53 50 59 54 68 68 68 68 68 68 57 57 68 68 68 68 57 50 50 50 50 47 51 59 68 68 68 68 57 51 47 50 50 50 50 50 50 50 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 68 68 68 68 68 68 68 68 68 68 68 59 57 57 57 42 42 36 36 39 48 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 50 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 50 50 39 39 20 16 8 8 8 8 8 9 12 22 22 34 36 59 59 59 59 59 50 53 57 57 57 57 57 57 57 57 57 59 59 59 59 59 59 59 59 57 57 57 68 68 57 57 57 54 54 57 54 54 54 57 54 54 54 47 47 48 48 48 48 59 59 68 68 68 68 57 57 57 57 57 59 59 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 57 59 57 57 52 52 57 57 59 57 57 57 57 57 57 59 59 68 68 68 59 59 59 59 59 57 68 68 68 68 68 68 68 68 68 68 59 59 59 59 68 68 68 68 57 57 57 57 57 57 59 57 57 57 52 57 57 59 59 57 68 68 68 68 68 68 59 59 59 59 59 59 57 57 59 57 47 57 57 48 48 48 57 59 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 59 57 59 59 57 57 57 57 57 57 59 59 59 59 59 59 57 57 48 48 46 48 46 54 47 47 43 43 43 47 44 43 40 28 28 43 43 59 59 59 47 39 39 43 59 43 48 48 48 41 50 59 59 59 59 44 41 41 44 44 41 41 42 41 41 39 37 36 37 36 37 41 41 47 41 40 39 43 30 30 25 27 32 32 29 29 30 34 34 31 41 40 40 48 48 48 53 59 57 48 43 37 37 37 36 37 37 37 37 37 31 31 41 41 41 41 46 46 41 34 36 28 28 18 18 16 16 22 16 30 34 36 23 23 12 20 12 19 19 25 15 11 11 11 11 10 12 19 19 19 20 26 26 30 28 28 30 33 29 25 22 18 22 30 30 33 25 17 9 9 9	Open. Hide. 6 6 6 6 8 8 8 8 13 19 23 28 34 34 23 28 22 28 39 27 21 11 10 12 11 10 9 11 11 18 11 15 15 30 26 37 32 34 48 27 27 27 22 30 37 37 41 30 25 12 9 10 12 10 10 10 13 25 23 37 30 22 22 29 29 32 32 34 24 24 29 29 43 39 37 37 30 30 37 43 42 42 48 43 59 48 43 43 43 43 43 48 48 48 48 47 47 47 47 42 41 43 43 43 47 44 57 59 47 44 46 43 42 41 41 38 41 41 44 46 48 57 47 47 47 47 47 47 57 57 57 57 48 43 42 43 43 29 28 27 27 27 43 43 43 32 32 30 35 37 36 43 28 43 43 43 43 35 43 43 32 38 17 36 24 42 42 50 57 43 43 37 32 43 38 38 35 38 35 35 37 37 35 35 37 42 37 37 57 57 52 52 57 52 50 57 57 44 44 43 33 33 44 43 57 57 47 47 47 57 57 57 57 57 57 68 68 68 68 68 57 57 57 54 54 57 57 57 43 48 42 35 35 39 39 44 47 48 57 54 48 47 47 43 57 57 48 48 57 57 57 54 54 54 54 54 68 68 68 68 68 59 59 59 59 59 48 48 47 43 43 42 42 42 47 37 57 43 48 48 48 48 40 46 39 37 37 32 28 23 22 24 27 37 41 40 40 40 43 43 43 48 48 39 43 39 36 36 39 43 59 43 48 48 48 48 48 48 43 43 43 43 43 43 43 43 36 36 43 43 43 48 48 48 48 48 57 57 48 48 48 34 37 28 28 33 28 25 33 28 28 29 32 24 30 30 33 39 36 43 47 47 39 31 28 28 25 25 25 28 30 28 32 32 36 39 34 37 33 37 24 24 16 19 32 32 48 30 30 18 18 18 24 30 33 37 30 30 28 40 28 35 35 42 37 32 32 39 39 43 40 40 25 25 33 32 30 16 15 17 26 30 39 48 46 46 46 30 29 25 23 18 18 22 24 25 18 21 21 29 30 28 28 28 37 37 39 39 36 36 36 39 39 39 39 42 42 42 48 48 30 30 24 24 22 22 23 34 34 30 30 30 37 16 17 19 24 19 14 11 11 15 21 21 21 23 12 13 19 28 25 34 33 28 23 28 23 20 20 21 20 15 19 15 22 12 11 11 18 18 20 18 18 12 12 12 19 19 20 24 24 25 25 19 12 9 11 8 9 10 11 17 18 17 17 18 18 18 18 21 25 15 15 17 16 25 16 14 14 15 24 19 20 16 16 15 9 9 9 15 19 11 10 9 9 11 14 10 13 11 20 18 21 13 16 18 23 24 25 14 16 19 16 16 13 18 15 10 8 8 8 8 8 8 8 10 15 21 23 24 24 11 11 10 9 10 12 10 10 14 9 9 9 8 8 8 8 8 8 8 12 21 18 14 8 8 8 9 8 10 8 6 6 8 8 9 10 12 10 11 11 11 10 10 9 9 9 9 9 10 10 10 10 10 8 10 16 19 17 15 14 7 7 8 12 8 8 8 8 8 15 8 8 8 8 8 10 8 10 10 11 11 8 8 8 8 8 8 6 6 10 11 12 10 10 10 10 10 13 16 10 8 8 8 8 6 6 10 8 8 8 8 10 8 8 8 8 8 8 8

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no460_a15.b1 MSMg01no460_a15.b1 CHROMAT_FILE:
MSMg01no460_a15.b1 PHD_FILE: MSMg01no460_a15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:33:11 2005
         (625 letters)



>mm_chrX_160556145_160557169
          Length = 1025

 Score = 1193 bits (617), Expect = 0.0
 Identities = 623/625 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   gctattacacagagaaactctgtctcgaaaacaaaacaaaacaaaatggatgtacaccat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 825 gctattacacagagaaactctgtctcgaaaacaaaacaaaacaaaatggatgtacaccat 766

                                                                       
Query: 61  aagagtaacatccatttccagggctgtagatgaaattaaatataactaataaagttaaac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 aagagtaacatccatttccagggctgtagatgaaattaaatataactaataaagttaaac 706

                                                                       
Query: 121 tcactatgttccaccttgtgaaaatgtctaaaagcgtagtcagccatacaatcaaaatga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 tcactatgttccaccttgtgaaaatgtctaaaagcgtagtcagccatacaatcaaaatga 646

                                                                       
Query: 181 gatgatcactactttattaaatcagcataggtaggatgtgtacaaattgcaggcaacaac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 gatgatcactactttattaaatcagcataggtaggatgtgtacaaattgcaggcaacaac 586

                                                                       
Query: 241 aaatatatctgcttgccctactaaagactaatatgcagaaactatacaagcaactgttgg 300
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 aaatagatctgcttgccctactaaagactaatatgcagaaactatacaagcaactgttgg 526

                                                                       
Query: 301 tgtgataacagaataaaattcccttgccatttttatccatctcttgtttaattttcctcg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 525 tgtgataacagaataaaattcccttgccatttttatccatctcttgtttaattttactcg 466

                                                                       
Query: 361 atgcatcatatacagagtaatataaacagtattcaaaaagatccatttttaatgatttct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 atgcatcatatacagagtaatataaacagtattcaaaaagatccatttttaatgatttct 406

                                                                       
Query: 421 atgccatgttatagccattctccagtgaaaatttttttcttaggtcttcaaaatatgaaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 atgccatgttatagccattctccagtgaaaatttttttcttaggtcttcaaaatatgaaa 346

                                                                       
Query: 481 tatagttacagccctgactttatttctagaaatgctcaaatcagtaactacaaacacaca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 tatagttacagccctgactttatttctagaaatgctcaaatcagtaactacaaacacaca 286

                                                                       
Query: 541 ctatacctacataatcagttatcaaaaagaaaattctagaatattttgagaagctaacac 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 ctatacctacataatcagttatcaaaaagaaaattctagaatattttgagaagctaacac 226

                                    
Query: 601 cttatgatttcattggtctttgtgg 625
           |||||||||||||||||||||||||
Sbjct: 225 cttatgatttcattggtctttgtgg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1025
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1015
Effective search space:   624225
Effective search space used:   624225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no460_a15.g1 MSMg01no460_a15.g1 CHROMAT_FILE:
MSMg01no460_a15.g1 PHD_FILE: MSMg01no460_a15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:33:11 2005
         (410 letters)



>mm_chrX_160372551_160373360
          Length = 810

 Score =  777 bits (402), Expect = 0.0
 Identities = 408/410 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ccaaatgtcagattgctaagtgccatgtgacagtgagcttggaggcccaaagcctgacaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccaaatgtcagattgctaagtgccatgtgacagtgagcttggaggcccaaagcctgacaa 260

                                                                       
Query: 61  tgaacgtctgcgaagaaagcgtctcaggaaagctgggataatggccacgagccgagccgg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgaacgtctgcgaagaaagcgtctcaggaaagctgggataatggccacgagccgagccgg 320

                                                                       
Query: 121 tagcgaccacattcactgatgatcactcttgtgctggttacatacacaaggactgggttt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tagcgaccacattcactgatgatcactcttgtgctggttacatacacaaggactgggttt 380

                                                                       
Query: 181 aacactggatgtactcaacactgacaactctaatttcctgggaaatgacaaaatccttta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aacactggatgtactcaacactgacaactctaatttcctgggaaatgacaaaatccttta 440

                                                                       
Query: 241 cctctttataaaaaactttcacaacacactattcaagatataccctggcagcccccaggg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctctttataaaaaactttcacaacacactattcaagatataccctggcagcccccaggg 500

                                                                       
Query: 301 gaaggaggaactctaagagatggggaaagagaagtatggaaatggtacttctaaattttg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 501 gaaggaggaactctaagagatggggaaagagaagtatggaaatggtacttcaaaattttg 560

                                                             
Query: 361 aaatgggatgttatagagaaaaaaaaatctacttttacatatagaaaaat 410
           |||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaatgggatgttttagagaaaaaaaaatctacttttacatatagaaaaat 610


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 410
Length of database: 810
Length adjustment: 9
Effective length of query: 401
Effective length of database: 801
Effective search space:   321201
Effective search space used:   321201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information