Query= MSMg01no461_b22.b1 MSMg01no461_b22.b1 CHROMAT_FILE:
MSMg01no461_b22.b1 PHD_FILE: MSMg01no461_b22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:35 2005
(500 letters)
>mm_chrX_119937962_119938861
Length = 900
Score = 609 bits (315), Expect = e-178
Identities = 349/369 (94%), Gaps = 15/369 (4%)
Strand = Plus / Minus
Query: 1 atattttacagtcagattaaaatgagtctgtctaacaacagtctggtgtcctttttcgtc 60
||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 372 atattttacagtcagattaaaatgagtttgtctaacaacagtctggtgttctttttcgtc 313
Query: 61 taaaaataagaagggtctcaatataagataggaagtgtaaattaatttatattgaaatta 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 312 taaaaataagaagggtctcaatataagatagggagtgtaaattaatttatattgaaatta 253
Query: 121 gaagtgtatcataacttctacaaacttcaatccaaatcatctgatcaaaatcttttttct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 gaagtgtatcataacttctacaaacttcaatccaaatcatctgatcaaaatcttttttct 193
Query: 181 ttttt---ctttttttttttttttt------------ggatttttgagacagggtttctc 225
||||| ||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 192 ttttttttcttttttttttttttttttttttttttttggatttttgagacaggctttctc 133
Query: 226 tgaatagccctggttgtcctggaactcactttgtaaaccaggctggcctcgaacttagaa 285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 tgaatagccctggttgtcctggaactcactttgtaaaccaggctggcctcgaacttagaa 73
Query: 286 atctgcctgcctctgccttccaagtgctaggattaaagatgtataccaccactgccctgc 345
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 atctgcctgcctctgcctcccaagtgctaggattaaagatgtataccaccactgccctgc 13
Query: 346 tggtcaaac 354
|||||||||
Sbjct: 12 tggtcaaac 4
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 500
Length of database: 900
Length adjustment: 10
Effective length of query: 490
Effective length of database: 890
Effective search space: 436100
Effective search space used: 436100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no461_b22.g1 MSMg01no461_b22.g1 CHROMAT_FILE:
MSMg01no461_b22.g1 PHD_FILE: MSMg01no461_b22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:35 2005
(487 letters)
>mm_chrX_119776613_119777499
Length = 887
Score = 880 bits (455), Expect = 0.0
Identities = 485/509 (95%), Gaps = 22/509 (4%)
Strand = Plus / Plus
Query: 1 aaagccagcctcatctacatagtaaacttgaagccatcatgggaaatttaagcacctgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaagccagcctcatctacatagtaaacttgaagccatcatgggaaatttaagcacctgtt 260
Query: 61 ataaaactactggcaacccccaacaaaaatgaaggaaaggatttatgttttatatattac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ataaaactactggcaacccccaacaaaaatgaaggaaaggatttatgttttatatattac 320
Query: 121 tttaatattgcatataatagtgccttaatttttatttctgttatctgtttttattttaga 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 321 tttaatattgcatataatagtgccttaatttttatttctgttatctctttttattttaga 380
Query: 181 caaagacaagatcttccttggtaatctacag----------------------atatata 218
||||||||||||||||||||||||||||||| |||||||
Sbjct: 381 caaagacaagatcttccttggtaatctacagatatatatatatatatatatatatatata 440
Query: 219 tatatatatatattctgatgtgtaggtttccctcttgcactttgccttacagaagctttt 278
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 441 tatatatatatattctgatgtgtaggttgccctcttgcactttgccttacagaagctttt 500
Query: 279 cagtttcatgaggtactacttaacaattgttgagcttagagcctgagtcactggtgttct 338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cagtttcatgaggtactacttaacaattgttgagcttagagcctgagtcactggtgttct 560
Query: 339 tttcaggaagtatccccctgtgccaatgtgttcaaggctatttctaatttctcttctttt 398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttcaggaagtatccccctgtgccaatgtgttcaaggctatttctaatttctcttctttt 620
Query: 399 agactcagtatatctgattttatgttgaggcccttgatccacttggtgttgagatttgtg 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agactcagtatatctgattttatgttgaggcccttgatccacttggtgttgagatttgtg 680
Query: 459 caggatgataaatatgtatctatttgtat 487
|||||||||||||||||||||||||||||
Sbjct: 681 caggatgataaatatgtatctatttgtat 709
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 47
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 487
Length of database: 887
Length adjustment: 10
Effective length of query: 477
Effective length of database: 877
Effective search space: 418329
Effective search space used: 418329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
