CTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAGAGAATCCGCG
GAATTCATTCTGTTTTCTTTTGCATGATTTGTATTATTAAAAATTTATAT
AGCTCTGAGCATGGAAGTAATAAACATATTTCTAAATTACGTGGAAAGTA
AAATGATACACGTGGTGTTAGGGAACGATTTAAGTTAGGATGACCTAAAA
CTTGTCATAATTGCATGCTTTTGTAGATCCTTTCTCTGTAAGTTATAACA
AATGTAGGGGTAGACATGACTACAGTGGGGTTTGCATAGTTGATCTATGG
ACTGTGTCTACCAGGTGGTATATTATTGTCATTTCTTCCAGCTAAGTTAT
ATTGATTTTATAACTTTTGCTTGTGTTTGGATGACTGGAATTCCTGTTCA
GGAATTTATAACAATTTAACCAAACAAATGTGGACAGCATATAAGGCTGT
GGATGGGTAGACTGATGACCATGTGTATTGTAGCTCTGCCTGACATCCAC
ACTGAGCTGCCTAGCATATCTAGAGAAGATGCTGACACCATGCATAATTC
TGACTGCTTCCGTTGCATGTGAAAGAGGAAATGCTAATGCCTGTTTGTAT
ATCATTTTAACAAAGCCCCCATGTTTCATTTTGAACATGAAAAAATACCC
CAATTTTGTGACTTTTATATCATTTGTAAAGGGTAAAAAATATGTTGCTT
GGTCCCATTATCCTCTTTCTGCAACTTGGTCCAAGAAATTAACTGTAGGG
GTTTTTCCCCTACCTTTGTTCTCTCAAAATGTTTTCTCCGTGA

NCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCTAAACCTGATAAACAGCTTTAGT
GCAGTAGCTGGATATAAAATTAACTCAAACAAGTCAATGGCCTTTCTCTA
CACAAAGGATAAACAGGCTGAGAAAGAAATTAGGGAAACAACACCTTTCA
CAATAGTCACAAATAATATAAAATACCTTGGTGTGACTCTAACTAAGACA
AAAGGATGGATCATTGAAAAACTACTCCACCCTGAAATCCATCCCATAGT
CAGCCATCAAATGCAAACACTATTGCACATGCCAGCAAGATTTTGCTAAA
AGGACCCTGATATAGCTGTTTCATGTGAGGCTATGTCAGTGACTGGCAAA
TACAGAAGTGGATGCTCACAATCATTTATTGGATGGAACATAGGGCTCCC
AATGGAGGAGCTAGAGAAAGTACCCAAAGAGCTGAAGGGGTCTGCTGCAA
CCCTATAGGTGGAAAAACAATATGAACTAATCAGTACCCCCAGAGCTCGT
GTCTCTAGCTGCATATATAGCAGAAGATGGCCTAGGTGGACATCATTGGG
AAGAGAGGCCCCTTGTTCTTGCAAACTTTATTTGCCCCCCTAATAGGGGA
ATGCCCGGCCCAAAAAATGGAAAGGTGTGGGTTATTTTACATCTCTTCCT
TATCCTTCCCCTTTTTTTTTCTTTTCCTTTATTTTTTCCTTCATTCTTAT
TCTTCTTCTTTTTATTCCTTCTATTTTCCTTACT

Query= MSMg01no462_e10.b1 MSMg01no462_e10.b1 CHROMAT_FILE:
MSMg01no462_e10.b1 PHD_FILE: MSMg01no462_e10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:36:14 2005
         (424 letters)



>mm_chrX_143917889_143918711
          Length = 823

 Score =  783 bits (405), Expect = 0.0
 Identities = 417/421 (99%), Gaps = 1/421 (0%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattcattctgttttcttttgcatgatttgtattattaaaaatttatatagctctgag 63
           |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 ggaattcattctgtattattttgcatgatttgtattattaaaaatttatatagctctgag 564

                                                                       
Query: 64  catggaagtaataaacatatttctaaattacgtggaaagtaaaatgatacacgtggtgtt 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 catggaagtaataaacatatttctaaattacgtggaaagtaaaatgatacacgtggtgtt 504

                                                                       
Query: 124 agggaacgatttaagttaggatgacctaaaacttgtcataattgcatgcttttgtagatc 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 503 agggaacgatttaagttaggatgacctaaaacttgtcataattgcatgcttttgtagat- 445

                                                                       
Query: 184 ctttctctgtaagttataacaaatgtaggggtagacatgactacagtggggtttgcatag 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ctttctctgtaagttataacaaatgtaggggtagacatgactacagtggggtttgcatag 385

                                                                       
Query: 244 ttgatctatggactgtgtctaccaggtggtatattattgtcatttcttccagctaagtta 303
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 384 ttgatctatggactgtgtctaccaggtggtatattaatgtcatttcttccagctaagtta 325

                                                                       
Query: 304 tattgattttataacttttgcttgtgtttggatgactggaattcctgttcaggaatttat 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tattgattttataacttttgcttgtgtttggatgactggaattcctgttcaggaatttat 265

                                                                       
Query: 364 aacaatttaaccaaacaaatgtggacagcatataaggctgtggatgggtagactgatgac 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aacaatttaaccaaacaaatgtggacagcatataaggctgtggatgggtagactgatgac 205

            
Query: 424 c 424
           |
Sbjct: 204 c 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 823
Length adjustment: 9
Effective length of query: 415
Effective length of database: 814
Effective search space:   337810
Effective search space used:   337810
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)