Query= MSMg01no463_g23.b1 MSMg01no463_g23.b1 CHROMAT_FILE:
MSMg01no463_g23.b1 PHD_FILE: MSMg01no463_g23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:37:50 2005
(320 letters)
>mm_chrX_22481882_22482600
Length = 719
Score = 561 bits (290), Expect = e-164
Identities = 311/322 (96%), Gaps = 9/322 (2%)
Strand = Plus / Plus
Query: 1 taactatgcccagatacagagagttgaatacaataaaatacagtaaggtatttgaccaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taactatgcccagatacagagagttgaatacaataaaatacagtaaggtatttgaccaaa 260
Query: 61 ggccaaatatctatgtataattattgaaaaaaaaaaacagcacaatggcctttctcattt 120
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 261 ggccaaatatctatgtataattattgaaaaaaaaaa-cagcacaatggcctttctcattt 319
Query: 121 ccaaagcacttcccaagtgaaaagcactatgaaataggtcaacactggaggttttagttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ccaaagcacttcccaagtgaaaagcactatgaaataggtcaacactggaggttttagttg 379
Query: 181 ggcacgttgctgtatgcctttaatcccaccaactcagaaagtggatctctggaagttcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ggcacgttgctgtatgcctttaatcccaccaactcagaaagtggatctctggaagttcta 439
Query: 241 tgacagcctgacctctttt----gtgagttcttagaaacccaatactatgtagagagacc 296
||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 440 tgacagcctgacctc----caaagtgagttcttagaaacccaatactatgtagagagacc 495
Query: 297 atgtctcacaataaatagctaa 318
|||||||| |||||||| ||||
Sbjct: 496 atgtctcaaaataaatatctaa 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 719
Length adjustment: 9
Effective length of query: 311
Effective length of database: 710
Effective search space: 220810
Effective search space used: 220810
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no463_g23.g1 MSMg01no463_g23.g1 CHROMAT_FILE:
MSMg01no463_g23.g1 PHD_FILE: MSMg01no463_g23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:37:50 2005
(567 letters)
>mm_chrX_22624727_22625693
Length = 967
Score = 822 bits (425), Expect = 0.0
Identities = 432/435 (99%), Gaps = 2/435 (0%)
Strand = Plus / Minus
Query: 1 attaccttcatgtaagttgttttcttcaaaataagaatccttttgaaaccttgcagcatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 attaccttcatgtaagttgttttcttcaaaataagaatccttttgaaaccttgcagcatg 376
Query: 61 actttcccctaggggtggcatcttgctggaatgtgaggatgggcatcagagatactgatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 actttcccctaggggtggcatcttgctggaatgtgaggatgggcatcagagatactgatg 316
Query: 121 acttttttgcttgaatgggcctgagtttggtatggaagaatgagtgttaaatgaaggttt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 tcttttttgcttgaatgggcctgagtttggtatggaagaatgagtgttaaatgaaggttt 256
Query: 181 gaacagagaagcaatgttcctaataaaaaactattgggcagtaaagatagatcac--ttt 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 255 gaacagagaagcaatgttcctaataaaaaactattgggcagtaaagatagatcacttttt 196
Query: 239 tttttagacaaggtcttactatatatttcccagactagcctcaaacatacagagatccac 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 tttttagacaaggtcttactatatatttcccagactagcctcaaacatacagagatccac 136
Query: 299 ctgcttatgcttcctgagttctgggattaaaggtatgcactactgtgattggctaaaaat 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 ctgcttatgcttcctgagttctgggattaaaggtatgcactactgtgattggctaaaaat 76
Query: 359 tattaatagtaatatggtatcaataactcattttctatttcatagcagtgatgtggaatt 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 tattaatagtaatatggtatcaataactcattttctatttcatagcagtgatgtggaatt 16
Query: 419 aatatagtggaacct 433
|||||||||||||||
Sbjct: 15 aatatagtggaacct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 567
Length of database: 967
Length adjustment: 10
Effective length of query: 557
Effective length of database: 957
Effective search space: 533049
Effective search space used: 533049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
