Query= MSMg01no464_a07.b1 MSMg01no464_a07.b1 CHROMAT_FILE:
MSMg01no464_a07.b1 PHD_FILE: MSMg01no464_a07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:38 2005
(469 letters)
>mm_chrX_55912991_55913859
Length = 869
Score = 884 bits (457), Expect = 0.0
Identities = 466/469 (99%)
Strand = Plus / Minus
Query: 1 taagtccttaaatctcgaaataaaatgtcacagaatgtagagagcaccaagtgtcttgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 taagtccttaaatctcgaaataaaatgtcacagaatgtagagagcaccaagtgtcttgat 481
Query: 61 tctgtgcggaagttttataagcttacttgctgcagctgatgtctcacatgcggtggaagc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 480 tctgtgcggaagttttataagcttacttgctgcagctgatgtctcacatgcgatggaagc 421
Query: 121 tctgaccaacacattcctctgtaaacattgaaacgcaaaaggtggaattacaaaacggct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 tctgaccaacacattcctctgtaaacattgaaacgcaaaaggtggaattacaaaacggct 361
Query: 181 gattagtaggcttgacattacaaatcatggagtctatagtataatagggtgaagatgggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 gattagtaggcttgacattacaaatcatggagtctatagtataatagggtgaagatgggg 301
Query: 241 atttttctaaattaacatgttttaaatgtaccaattccttgggcacaatatcataacttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 atttttctaaattaacatgttttaaatgtaccaattccttgggcacaatatcataacttt 241
Query: 301 tgatagctctatagagtggtatttcggaggaactgctcatctatattgtccaggctgcct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 tgatagctctatagagtggtatttcggaggaactgctcatctatattgtccaggctgcct 181
Query: 361 caaatacccagacttaaacaatctacttgcctcacatcattttaagtatctcagactaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 180 caaatacccagacttaaacaatctacttgcctcacatcattttaagtatctcagattaca 121
Query: 421 gttatgtgtcacagctcctgaccacagcgacttttttagagagcaacat 469
||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 120 gttatgtgtcacagctcctgaccacagtgacttttttagagagcaacat 72
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 869
Length adjustment: 10
Effective length of query: 459
Effective length of database: 859
Effective search space: 394281
Effective search space used: 394281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no464_a07.g1 MSMg01no464_a07.g1 CHROMAT_FILE:
MSMg01no464_a07.g1 PHD_FILE: MSMg01no464_a07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:38 2005
(533 letters)
>mm_chrX_55760047_55760979
Length = 933
Score = 936 bits (484), Expect = 0.0
Identities = 524/540 (97%), Gaps = 8/540 (1%)
Strand = Plus / Plus
Query: 1 ttcactgggatggatgacagggtttcagaaggaacttgcttgctagatttcaggttgtat 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcactgggatgtatgacagggtttcagaaggaacttgcttgctagatttcaggttgtat 260
Query: 61 caggaaggctgccacatgtgtggcatttcagcccattagcaaataggtggcagtcttgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caggaaggctgccacatgtgtggcatttcagcccattagcaaataggtggcagtcttgat 320
Query: 121 caacttatcaaagaaactaaccttttatcttttggaaaataaactagcaacagtgattaa 180
||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 caatttatcaaagaaactaaccttttatcttttggaaaataaactagcaacagtgaagaa 380
Query: 181 atatgagagcagaatataaaaaatatttagattaatttttaaaatataatccatgattaa 240
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 381 atatgagagcagaatataaaaaatatttaggttaatttttaaaatataatccatgattaa 440
Query: 241 tcta-g-ttcttataatgatgcattgtatgtgtcttaaggagttagtttttttttt---- 294
|| | | ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tccatgattc-tataatgatgcattgtatgtgtcttaaggagttagtttttttttttttt 499
Query: 295 -aattttaatgaactatttctaaaagttaaaataactttagtattgcaattccacatagt 353
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aaattttaatgaactatttctaaaagttaaaataactttagtattgcaattccacatagt 559
Query: 354 catacttaaacctgaaggctagtcatgagtaggctataaggtgttgtaagtatatttgca 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 catacttaaacctgaaggctagtcatgagtaggctataaggtgttgtaagtatatttgca 619
Query: 414 tacttagcctcacattagagtaggatgagagaggaacccgagcctggccattcctgattc 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tacttagcctcacattagagtaggatgagagaggaacccgagcctggccattcctgattc 679
Query: 474 atccaatacatggaactgttagccagaagtaggcattgaactagaggcctggactgcaca 533
||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct: 680 atccaatacatggaactgttagccagaagtaggcattgaactagaggccgggaatgcaca 739
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 533
Length of database: 933
Length adjustment: 10
Effective length of query: 523
Effective length of database: 923
Effective search space: 482729
Effective search space used: 482729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
