Query= MSMg01no465_f23.b1 MSMg01no465_f23.b1 CHROMAT_FILE:
MSMg01no465_f23.b1 PHD_FILE: MSMg01no465_f23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:40:27 2005
(432 letters)
>mm_chrX_19480368_19481199
Length = 832
Score = 762 bits (394), Expect = 0.0
Identities = 420/432 (97%), Gaps = 6/432 (1%)
Strand = Plus / Minus
Query: 1 aattttctttacgtctccactttttttttttttttttagtttatccttaaatttgttttt 60
|||||||||||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 543 aattttctttacatctcca------atttttttttttagtttatccttaaatttgttttt 490
Query: 61 aataatgatgttaagaacctcaagcggggaatgggaacccatttcccctgtatcatccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 aataatgatgttaagaacctcaagcggggaatgggaacccatttcccctgtatcatccag 430
Query: 121 cagccatgattgactccaaaattctagtaacaggaccatcccctagaaagcagattcacc 180
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 cagccatgaatgactccaaaattctagtaacaggaccatcccctagaaagcagattcacc 370
Query: 181 taaggctatgctaaatagatgggaggaataatttttcttttcatgagataatgtactctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 369 taaggctatgctaaatagatgggaggaataatttttcttttcatgagataatgtactttt 310
Query: 241 ttttcttagacctaccccacccacctcctcggtggaattgctacagtggttttgtaaggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 ttttcttagacctaccccacccacctcctcggtggaattgctacagtggttttgtaaggt 250
Query: 301 ttacttgcctaagttgtaacatacttccttctttccttcttccctcttcctccgcttttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 ttacttgcctaagttgtaacatacttccttctttccttcttccctcttcctccgcttttt 190
Query: 361 ccccttcctccttctcatatctcttatgatttctttcagatgattgctaatgcagaggtg 420
|||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ccccttcctcctcctcatacctcttatgatttctttcagatgattgctaatgcagaggtg 130
Query: 421 ggcttttccaga 432
||||||||||||
Sbjct: 129 ggcttttccaga 118
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 432
Length of database: 832
Length adjustment: 9
Effective length of query: 423
Effective length of database: 823
Effective search space: 348129
Effective search space used: 348129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no465_f23.g1 MSMg01no465_f23.g1 CHROMAT_FILE:
MSMg01no465_f23.g1 PHD_FILE: MSMg01no465_f23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:40:27 2005
(401 letters)
>mm_chrX_19323727_19324527
Length = 801
Score = 768 bits (397), Expect = 0.0
Identities = 400/401 (99%)
Strand = Plus / Plus
Query: 1 tttgatgttatacacacaggtctcactttgtaattagtgtgtctggacataaatatggat 60
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgatgttatacacacaggactcactttgtaattagtgtgtctggacataaatatggat 260
Query: 61 tcaaattgcctcctgtttcttccagctacctttctgtcatcacacatcaagttcagaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcaaattgcctcctgtttcttccagctacctttctgtcatcacacatcaagttcagaatt 320
Query: 121 cactgcacactttcctgtgtagccgaactacagcttgttgttggatttgttttcatctct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cactgcacactttcctgtgtagccgaactacagcttgttgttggatttgttttcatctct 380
Query: 181 tgttttttacatgaaaataccacaggctcctagattactttgaaacaaaactaaattttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgttttttacatgaaaataccacaggctcctagattactttgaaacaaaactaaattttc 440
Query: 241 atttaattaatacagtgagctctcactttcatcttcttagcatgatttagtaaaatacat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atttaattaatacagtgagctctcactttcatcttcttagcatgatttagtaaaatacat 500
Query: 301 tctatcaataacttaataatcaattttggcccagggcaggttaaagtatgcaaatacctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tctatcaataacttaataatcaattttggcccagggcaggttaaagtatgcaaatacctg 560
Query: 361 ccctgaattgtaccaacctgttcaagagcatttgcatgtta 401
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccctgaattgtaccaacctgttcaagagcatttgcatgtta 601
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 401
Length of database: 801
Length adjustment: 9
Effective length of query: 392
Effective length of database: 792
Effective search space: 310464
Effective search space used: 310464
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
