XXXXXXXXXXXXXXXXXXXXXXXXXXTGCAAAATGCGCGGAATTCTCTCC
AGCTGGCAGATATACCCACTCTTTGAGATCCTGAGGCTCCTATGTGTTAA
ACCCCAGTCTTTGGGGATCTCAGTTGAAGTTCCCTTTAAAAATTATGGGT
AGACCACTAGAGGAGGGTTTGTTTTGTTTTGTTCCCCAAAACTATATCCT
GGCATCTTGCTTGGCAACTGCAGGGGATACATCATAAGCAAGCTGCTTAA
CAATGCTAAGATGAGCAGTTACTACAACTGTAGAAACTAGTATAAATTAG
CTGGGGTATCTTTTTCTCAGTTTCGAGAATATAGTTGGGTAATTTTTTAC
AAGGCTTATGATCCAGGACTCAAATTCTAGTCATGACTAAAAATGGCCTC
ACCAAGAATCTAAAATAGAAAATTTTCTGTACTATCCTCCCCTATCACAA
AGTACCATAGAGCAGTTCATCAATCAAAATGATAATAAAAAGTAAAATTT
CAGGTGAATTTTGCTTATGAAATAGTAAAAAGGCTAGACTATATTCTACA
TGACATACTGATTTAACAAAACGTACTTAATTAGCAAGAGAACATGAAAC
ATCTACTCATTAAGTTCATAATTGCTAACTTTTATTAAGCAATGACTATC
CAATATTCCGTCACATAAATAACATGTCATTAATGCTTTAATATATTTTT
GTACCTTGACTAATTCGTGCTGCTTTGCCTTAA

GTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXCAGGACACAATGAGAAGACCAAACCTACAGATAG
TAGGAGTAGTTGAGAATGAAAATTTTCAACTTAAAGGGCCAGCAAATATC
TTCAACAAAATTATAGAAGAAAACTTCCCAAACCTAAAGAAAGAGATGCC
CATGAACATACAAGAAGCCTACAGAACTCCCAATAGACTGGACCAGAAAA
GAAATTCCTCCCGACACATAATAATCAGAACAACAAATGCACTAAATAAA
GAAAGAATATTAAAAGCAGTAAGGGAAAAAGTTCAAGTAACATATAAAGG
CAGGCCTATCAGAATTACACCAAACTTTTCACCAGAGACTATGAAAGCTA
GAAGAGCCAGGAGAGATGTTATACAAACCCAAAGAGAAAACAAAGGCCAG
CCAAGGCTACTATACCCAGACAAACTCACAATTACCATAGATAAAGAAAC
CAAAGTATTCCACGACAAAACCAAATTCACATATTATCTTTCCATGAATC
CAGCCCTTCAAAGGATTATAGCAGAANAAAAAAAANAAAAAAAAAAAACC
CCNNAAAAACAATACCAGGACAGAAACTACACCCTAGAAAATGCAAGAAA
GTAATCCCCTCACAAAAACTAAAACCAAAAAGGAAGACACCCCCCAAAAC
CGAATGGCCCCTTCTAAAAACAAAAATAATAGGAAGCGCCAATTAATTTT
TCCT

Query= MSMg01no467_h20.b1 MSMg01no467_h20.b1 CHROMAT_FILE:
MSMg01no467_h20.b1 PHD_FILE: MSMg01no467_h20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:43:23 2005
         (580 letters)



>mm_chrX_115714069_115715048
          Length = 980

 Score = 1067 bits (552), Expect = 0.0
 Identities = 573/584 (98%), Gaps = 8/584 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   tacccactctttgagatcctgaggctcctatgtgttaaaccccagtctttggggatctca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tacccactctttgagatcctgaggctcctatgtgttaaaccccagtctttggggatctca 260

                                                                       
Query: 61  gttgaagttccctttaaaaattatgggtagaccactagaggagggtttgttttgttttgt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttgaagttccctttaaaaattatgggtagaccactagaggagggtttgttttgttttgt 320

                                                                       
Query: 121 tccccaaaactatatcctggcatcttgcttggcaactgcaggggatacatcataagcaag 180
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 321 tccccaaaactatatcctggcatcttgcttggcaactgcaggggatgcatcataagcaag 380

                                                                       
Query: 181 ctgcttaacaatgctaagatgagcagttactacaactgtagaaactagtataaattagct 240
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgcttaacaatgctaagatgagtagttactacaactgtagaaactagtataaattagct 440

                                                                       
Query: 241 ggggtatcttttt----ctcagtttcgagaatatagttgggtaattttttacaaggctta 296
           |||||||||        |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggggtatct----agacctcagtttcgagaatatagttgggtaattttttacaaggctta 496

                                                                       
Query: 297 tgatccaggactcaaattctagtcatgactaaaaatggcctcaccaagaatctaaaatag 356
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 tgatccaggactcaaattctagtcatgactaaaaatggcctcaccaagaatctaaaatag 556

                                                                       
Query: 357 aaaattttctgtactatcctcccctatcacaaagtaccatagagcagttcatcaatcaaa 416
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 aaaattttctgtactatcctcccctatcacaaagtaccatagagcagttcatcaatcaaa 616

                                                                       
Query: 417 atgataataaaaagtaaaatttcaggtgaattttgcttatgaaatagtaaaaaggctaga 476
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 atgataataaaaagtaaaatttcaggtgaattttgcttatgaaatagtaaaaaggctaga 676

                                                                       
Query: 477 ctatattctacatgacatactgatttaacaaaacgtacttaattagcaagagaacatgaa 536
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 ctatattctacatgacatactgatttaacaaaacgtacttaattagcaagagaacatgaa 736

                                                       
Query: 537 acatctactcattaagttcataattgctaacttttattaagcaa 580
           ||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 737 acatctactcattaagttcataattgctaacttttattaggcaa 780


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 580
Length of database: 980
Length adjustment: 10
Effective length of query: 570
Effective length of database: 970
Effective search space:   552900
Effective search space used:   552900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)