Query= MSMg01no470_e16.b1 MSMg01no470_e16.b1 CHROMAT_FILE:
MSMg01no470_e16.b1 PHD_FILE: MSMg01no470_e16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:47:09 2005
(559 letters)
>mm_chrX_36742024_36742981
Length = 958
Score = 1058 bits (547), Expect = 0.0
Identities = 556/559 (99%), Gaps = 1/559 (0%)
Strand = Plus / Minus
Query: 1 ttgatgacagttttaaatattacattaaagtactgtaaacatccaaggaagtgcctaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 ttgatgacagttttaaatattacattaaagtactgtaaacatccaaggaagtgcctaaca 699
Query: 61 tctagaaaggaaataataaatattggtagggtcagaataaattatatctccctttctaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 tctagaaaggaaataataaatattggtagggtcagaataaattatatctccctttctaca 639
Query: 121 aggaacaatctttcaatccagacatatttaatttgcatggctgaaatgtttgcatattta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 aggaacaatctttcaatccagacatatttaatttgcatggctgaaatgtttgcatattta 579
Query: 181 ttaaaatttaatctttgcttacattatagcttagatgctaaaaattcctcagagttttat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 ttaaaatttaatctttgcttacattatagcttagatgctaaaaattcctcagagttttat 519
Query: 241 ctgttgttgatttgctgtctagagtggaactcttcacacactctaaaattcttagaatgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 ctgttgttgatttgctgtctagagtggaactcttcacacactctaaaattcttagaatgt 459
Query: 301 gagtcctaatgagaaatcattaggtcatttgggacatacccagaaacaaatatttttctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 gagtcctaatgagaaatcattaggtcatttgggacatacccagaaacaaatatttttctc 399
Query: 361 ctttgctctataatatggctcaagcaaaagacaaaaatattggtctactatggtcacacc 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 398 ctttgctctataatatggctcaagcaaaagacaaaaatattggtctactatggtcaca-c 340
Query: 421 caccatttatatttatatatttaacaccttctccaaagtcaaaggtttactgaatctttg 480
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 339 caccatttatatttatatatctaacaccttctccaaagtcaaaggtttactgaatctttg 280
Query: 481 gttccctcactcacctcaaaaatactatacaccacagtgtggaacagaatagcagcagaa 540
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 279 gttccctcactcacctcaaaaatactatacaccacagtgtggaacagagtagcagcagaa 220
Query: 541 cacagagggaaattaaatg 559
|||||||||||||||||||
Sbjct: 219 cacagagggaaattaaatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 559
Length of database: 958
Length adjustment: 10
Effective length of query: 549
Effective length of database: 948
Effective search space: 520452
Effective search space used: 520452
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no470_e16.g1 MSMg01no470_e16.g1 CHROMAT_FILE:
MSMg01no470_e16.g1 PHD_FILE: MSMg01no470_e16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:47:09 2005
(521 letters)
>mm_chrX_36621083_36622003
Length = 921
Score = 683 bits (353), Expect = 0.0
Identities = 365/369 (98%)
Strand = Plus / Plus
Query: 1 agaagtaccttttatatattatagtttatttattaatggctgtttttatgctatagtcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agaagtaccttttatatattatagtttatttattaatggctgtttttatgctatagtcat 260
Query: 61 agagccaattagctgcaatagaggctttatagtctacagatctggagtatctatttgctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agagccaattagctgcaatagaggctttatagtctacagatctggagtatctatttgctc 320
Query: 121 tttatagtaaaattttccagatagttgcttatataatctttcatcaaaagttttgtgcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 tttatagtaaaattttccagatagttgcttatataatctttcatcaaaagtttcgtgcta 380
Query: 181 acacaacatccatttgctgtgtaattaatgaatgcattgttgcttacattaataaactac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acacaacatccatttgctgtgtaattaatgaatgcattgttgcttacattaataaactac 440
Query: 241 attccttttgtttacttatcttttagaggacttaacaagtcccatatatatcactaaatt 300
|||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attcctctagtttatttatcttttagaggacttaacaagtcccatatatatcactaaatt 500
Query: 301 tcttacatgcggcccattatttcatttaatacttcacaagagtacagtcatgtactcctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcttacatgcggcccattatttcatttaatacttcacaagagtacagtcatgtactcctg 560
Query: 361 attattttc 369
|||||||||
Sbjct: 561 attattttc 569
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 521
Length of database: 921
Length adjustment: 10
Effective length of query: 511
Effective length of database: 911
Effective search space: 465521
Effective search space used: 465521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
