Query= MSMg01no470_g09.b1 MSMg01no470_g09.b1 CHROMAT_FILE:
MSMg01no470_g09.b1 PHD_FILE: MSMg01no470_g09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:47:17 2005
(139 letters)
>mm_chrX_95489579_95490117
Length = 539
Score = 253 bits (131), Expect = 2e-72
Identities = 137/139 (98%)
Strand = Plus / Minus
Query: 1 acggaaacagagcacatctatgtactttcacaaatatctgttttggaggtaagagagaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 acggaaacagagcacatctatgtactttcacaaatatctgttttggaggtaagagagaaa 280
Query: 61 aatctatggtctcctcttacacaagttcccttgaaaagtacatctgaaagaagcaaagtt 120
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 aatctatggtctcctcacacacaagttcccttgaaaagtacatctgaaagaagcaaagtt 220
Query: 121 tcttctttgaaatgtgtgt 139
|||||||||||||||||||
Sbjct: 219 tcttctttgaaatgtgtgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 139
Length of database: 539
Length adjustment: 8
Effective length of query: 131
Effective length of database: 531
Effective search space: 69561
Effective search space used: 69561
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no470_g09.g1 MSMg01no470_g09.g1 CHROMAT_FILE:
MSMg01no470_g09.g1 PHD_FILE: MSMg01no470_g09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:47:18 2005
(448 letters)
>mm_chrX_95247740_95248587
Length = 848
Score = 801 bits (414), Expect = 0.0
Identities = 438/450 (97%), Gaps = 8/450 (1%)
Strand = Plus / Minus
Query: 1 tatttctgtgatcttccttgacttcccacgacaaagtactgactctcttttagtcaaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 tatttctgtgatcttccttgacttcccacgacaaagtactgactctcttttagtcaaatt 587
Query: 61 taacaacctaaccaggctctatgccgcctcatacttacttcccagatcaatgcatgactg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 taacaacctaaccaggctctatgccgcctcatacttacttcccagatcaatgcatgactg 527
Query: 121 ctgctttcaaaccacatgattagctcaaagactttactggttaatatttataaaaaacac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 ctgctttcaaaccacatgattagctcaaagactttactggttaatatttataaaaaacac 467
Query: 181 tttgaagatgaaatctttgttgtgtagggaaacactagacacagatagtggaattttgag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 tttgaagatgaaatctttgttgtgtagggaaacactagacacagatagtggaattttgag 407
Query: 241 atcttttt----tttcttgtctactggcaatattaaacaatacaggtttttttacttaat 296
||| | ||||||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 406 atc----taggctttcttgtctaatggcaatattaaacaatacagttttttttacttaat 351
Query: 297 gtggtcgtttcagtgacaatagtcttcttagactgaaataacaaaggtcaaataaagagg 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 gtggtcgtttcagtgacaatagtcttcttagactgaaataacaaaggtcaaataaagagg 291
Query: 357 ctgcaaaatctgatggggtttttcccagctccattatagaatgcctggattacttctgaa 416
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 290 ctgcaaaatctgatggggtttttcccagttccattatagaatgcctggattacttctgaa 231
Query: 417 gacgagttattattgcttcatctctctaac 446
||| ||||||||||||||||||||||||||
Sbjct: 230 gacaagttattattgcttcatctctctaac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 848
Length adjustment: 10
Effective length of query: 438
Effective length of database: 838
Effective search space: 367044
Effective search space used: 367044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
