ATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAAAGAGGATCCGCG
GAATTCAATCTTTACTTCAAGCTGGCCTTGAACTCATAAATTTGCCTGCC
CCTGCCTCTGCCTACCAAGAGCAGGGATAAAAGGTATGCACCACTACACT
GTCTTATTTATCATTCTGCTATTAACTTATTGTGTCTAGGTGGTTGTTTT
CAATCTATTTTGTTTTATTTTATTTTATTTTATGAGGCATTTTCTTTATT
TTCATTTCAAATGTTATCCCCTTCCCTGGTTTCCCCTCTGAAAACCCACT
ATGCCATCCCTCCTCTCTTATTCAACAAAATACCCACTCCTACTTCCTAG
TCCTGATATTCCCTTACACTGGGGTATAGAGCCTTCTCTTGAACAGGAGC
TTCACCTCTCACTGGTGTCCAAATAGGCCATTCTCTGCTACATATGAAGC
TGCAGCCATGGGCCCCGCCCTATGTACTCTTTGGTTGGTCTTTTTTTAAT
TGTATATTTTCTTTATATACATTTCAAATGATGTCCGTTTTCAGTTTCCC
ACCCTTCCAGAAACCCTCTATCCCATCCCCTCCCCACTGTTTCATGAGGG
TCTTCCTCCATCTGGATACCCATTCCCACATCGCATTGTGGTGGCTAGCA
AGGTTACCTCTCTGTCTCCTCATCATTCTACAGCATATTGGTGATCCTGT
GGATGATGGGGAAAAGAACACTGGATTCTGACCATTGCAGAGTAC

TCGATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTCCTGGGAAGAGGAGGTGGGACTTGA
TGCATTAGGGACTAATAAGACATCACTGACATTACCGTTAGGCGAAGAAG
GTTTGGAGCCCTCTTTGTCTGATGGGGCCTGTTGCTTGACAAGAGAGTTC
TTCTCCAAAATGCTTTGGAGGAGAATTGGAAAGAATACAGTTATGTAGGG
TAGGGAACAAACTTTTGAACTCCTTCTGGAAGAGGAGGCATTTATGAATT
TCTTTTAAGCACACGTGGGAAGTCTATGGGATGCCTGGGCAGATGTGCAA
TGTCCCATAGAGTCTTGGAAACTTTGCGTTAGTTCTCAAAACTTTTTGGT
GCATAAGGACCTGCCCTGAGAATTTGAAGATCCCAGATCTCCTTGGTTAG
ATTGGGAAGGGTGTAGGGAACCTTGAATGTGTGGGGAAATTACCTGTCCA
TGTTGTCCAGCAGACGATGGCCCAGGCACTGTGTTATCTTCTTTGAATTT
GTGACTGGTATCTCCAGCCCTGTGTTTGGAAGATGCTGCAGGCACTCTGG
CACCCGACTGGTCAAAATCCCTAGGTTCTTCAAACCCAGTGGACATAGGC
TGGCTTCTTTTCACCTATCTATGCATGGACACAGCAGATGAGGCCACTCA
TTTTCTGGTGGAAGGTGGTAAAACAGATTGTCTGGTACCCTGCTCAGTG

Query= MSMg01no471_m11.g1 MSMg01no471_m11.g1 CHROMAT_FILE:
MSMg01no471_m11.g1 PHD_FILE: MSMg01no471_m11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:49:09 2005
         (608 letters)



>mm_chrX_121321761_121322768
          Length = 1008

 Score =  484 bits (250), Expect = e-140
 Identities = 529/656 (80%), Gaps = 77/656 (11%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcctgggaagaggaggtgggacttgatgcattagggactaata--agacatcactgacat 58
           ||||||| ||||||||  | ||||||| |||| | ||| || |  ||| |||| |||  |
Sbjct: 150 tcctggggagaggaggcagaacttgatacatttgagac-aa-aggagaaatcagtgatgt 207

                                                                       
Query: 59  taccgttaggcgaagaaggtttggagccctctttgtctgatggggcctgttg-------- 110
           |||| || || |||| ||||||||| ||||| ||||||||||||||||||||        
Sbjct: 208 tacctttgggagaaggaggtttggatccctccttgtctgatggggcctgttgtaggtccc 267

                                                                       
Query: 111 cttgacaaga-gagttcttctccaaaatgctttggaggagaattggaaagaatacagtta 169
           |||||| ||| ||| |||| ||||| ||||||||| ||||||||||||||| || |||||
Sbjct: 268 cttgaccagaggag-tcttgtccaacatgctttggtggagaattggaaagattagagtta 326

                                                                       
Query: 170 tgtagggtaggg---aacaaacttt-tgaactccttctggaagaggaggcatttatgaat 225
           ||||||||||||   |||   ||||  ||||||||||||||||||||||||| ||||| |
Sbjct: 327 tgtagggtagggggtaac---ctttgggaactccttctggaagaggaggcatgtatgagt 383

                                                                       
Query: 226 tt-cttttaagcacacgtgggaagtctatgggatgcctgggcagatgtgcaatgtcccat 284
           || ||||| ||||||  ||| |||||| ||||||||||||||||||||| ||||||||||
Sbjct: 384 ttcctttt-agcacaattggaaagtctttgggatgcctgggcagatgtggaatgtcccat 442

                                                                       
Query: 285 agagtcttggaaact-t-tgcgttagttctcaaaactttttgg--tgcataagga----- 335
           ||| ||||||||| | | || ||||||||| | ||| | ||||  || ||| |||     
Sbjct: 443 agactcttggaaa-tatctg-gttagttct-agaacatcttgggttg-atagggacagtc 498

                                                                       
Query: 336 cctg-------------------------ccctgagaat-ttg-----------aagatc 358
           ||||                         ||||||| || |||           ||||||
Sbjct: 499 cctgagcatgttgggttgatagggagagtccctgagcatcttggggagaagtgaaagatc 558

                                                                       
Query: 359 ccagatctccttggttagattgggaagggtgt-agggaaccttgaatgtgtggggaaatt 417
           |||||||||||||| ||||| ||||||||||| | |||||||||||| ||||||||||||
Sbjct: 559 ccagatctccttggctagatcgggaagggtgtga-ggaaccttgaatttgtggggaaatt 617

                                                                       
Query: 418 acctgtccatgttgtccagcagacgatggcccaggcactgtgttatcttctttgaa-ttt 476
           ||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||| |||
Sbjct: 618 acctgtccatgttgtccagcagaagatggcccaggcactttgtgatcttctttgaacttt 677

                                                                       
Query: 477 gtgactggtatctccagccctgtgtttggaagatgctgcaggcactctggcacccgactg 536
            ||||||| ||||||||||| |||||||||||||| ||||||||||||||||||| ||||
Sbjct: 678 -tgactggaatctccagccccgtgtttggaagatgttgcaggcactctggcacccaactg 736

                                                                   
Query: 537 gtcaaaatccctaggttcttcaaacccagtggacataggctggcttcttttcacct 592
           |||||||||| |||||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 737 gtcaaaatccataggttcttcaaacacagtggacatagactggcttcttttcacct 792


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 608
Length of database: 1008
Length adjustment: 10
Effective length of query: 598
Effective length of database: 998
Effective search space:   596804
Effective search space used:   596804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)