CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCCACCCAGTGGCACTGCAGATAATAGAATCTCAATGTCACCAGAGG
TGACAGCTTGGTAATAGAATGAAATGAATGAGATGAGAAATCATGAAGAG
TTAGAGTTCATTTTTTATTTTGCGAAGAGCCTCCTTTAAGGACCATGGCA
AAGTAAAACCACCATTAGACAAAAGAACAGTACCACGTAATTCTAGACAA
GTCTCTGAGGCTCTTTGGACTTTTGCTTTTGTCTCCGCAAATTATTAATG
AGATTTGTTCTTTCTACTTCATGGCTATGCTGTGAGATGATGCATGGCAA
CATATCTTAAAAATGTATGAATGCCTAGCATATCCTCAAAGACATTTGTA
TGCTTTTACATTAGGCCAATTATGCTATAATTTACAAAGTCCTTTTGATT
TCTTTTTCAGACTTCTCTTCCAGAGACTCAGAATTACTGGCACCAAAAAA
GCACTCTAGGATTTTTTTTCTTTGAGATGTATTCTACATGCCACATTATT
CACTCTTTTAAAGTGTACAATTTTGTGGCTTTTAGTGTATTCAAGAAGTT
TTACAAACATCACCACTATCTAATTCCAGATGGTTTTCATTACCTCAAAA
AGAAATCCTGTGCTCATTAGTGCTTGCTCCCAATGGCCCCTCCTCCCAGC
CTCTGGCAAGCACTACTTTACTTTCTGTCTCTGTAAATTTGTCAACTCCA
GAAAC

AATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCAAATGGATGAG
AAGAACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAAT
CAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCA
AAAATTCATGTGAGAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACA
CTCCTCCATTGTTGGTGGGATTGCATGCTTGTACAACCACTCTGGAAATC
AGTCTGGAGGTTCCTCAGAGATTTGGACATACATAGTACTACAGGAATAT
CCCCCAATACCTCTTCTAGGCATATACCAAAAAGATGCTCCAACTTGTAA
TAAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCA
GAAGCTGGAAAGAACCCCTCAACAGAGGAATGGATACAGAAAATGTGGTA
CATTTACACAATGGAGTACTACTCAGCTATTAAAATGAATGAATTTATGA
AATTCCTAGGCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTA
ACCCAATCACAAAAGAACTCACACAATATGTACTCACTGATAAGTGGATA
TTAGCCCACAAACTTAGAATACCCAAGATATAAGATACAATTTGCTAAAC
AAATGAAACTCAAGAATAAGGAAGACCAAAGTGTGGACATTTTGTCCCTT
CTTAGAATTGGGACN

Query= MSMg01no481_a21.b1 MSMg01no481_a21.b1 CHROMAT_FILE:
MSMg01no481_a21.b1 PHD_FILE: MSMg01no481_a21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:01:33 2005
         (683 letters)



>mm_chrX_95466076_95467158
          Length = 1083

 Score = 1290 bits (667), Expect = 0.0
 Identities = 676/679 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcccacccagtggcactgcagataatagaatctcaatgtcaccagaggtgacagct 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcccacccagtggcactgcagataatagaatctcaatgtcaccagaggtgacagct 264

                                                                       
Query: 65  tggtaatagaatgaaatgaatgagatgagaaatcatgaagagttagagttcattttttat 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tggtaatagaatgaaatgaatgagatgagaaatcatgaagagttagagttcattttttat 324

                                                                       
Query: 125 tttgcgaagagcctcctttaaggaccatggcaaagtaaaaccaccattagacaaaagaac 184
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 325 tttgcgaagagcctcctttaaggaccttggcaaagtaaaaccaccattagacaaaagaac 384

                                                                       
Query: 185 agtaccacgtaattctagacaagtctctgaggctctttggacttttgcttttgtctccgc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agtaccacgtaattctagacaagtctctgaggctctttggacttttgcttttgtctccgc 444

                                                                       
Query: 245 aaattattaatgagatttgttctttctacttcatggctatgctgtgagatgatgcatggc 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aaattattaatgagatttgttctttctacttcatggctatgctgtgagatgatgcatggc 504

                                                                       
Query: 305 aacatatcttaaaaatgtatgaatgcctagcatatcctcaaagacatttgtatgctttta 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aacatatcttaaaaatgtatgaatgcctagcatatcctcaaagacatttgtatgctttta 564

                                                                       
Query: 365 cattaggccaattatgctataatttacaaagtccttttgatttctttttcagacttctct 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cattaggccaattatgctataatttacaaagtccttttgatttctttttcagacttctct 624

                                                                       
Query: 425 tccagagactcagaattactggcaccaaaaaagcactctaggattttttttctttgagat 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tccagagactcagaattactggcaccaaaaaagcactctaggattttttttctttgagat 684

                                                                       
Query: 485 gtattctacatgccacattattcactcttttaaagtgtacaattttgtggcttttagtgt 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gtattctacatgccacattattcactcttttaaagtgtacaattttgtggcttttagtgt 744

                                                                       
Query: 545 attcaagaagttttacaaacatcaccactatctaattccagatggttttcattacctcaa 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 attcaagaagttttacaaacatcaccactatctaattccagatggttttcattacctcaa 804

                                                                       
Query: 605 aaagaaatcctgtgctcattagtgcttgctcccaatggcccctcctcccagcctctggca 664
           ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 805 aaagaaatcctgtactcattagtgcttgctccccatggcccctcctcccagcctctggca 864

                              
Query: 665 agcactactttactttctg 683
           |||||||||||||||||||
Sbjct: 865 agcactactttactttctg 883


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 683
Length of database: 1083
Length adjustment: 10
Effective length of query: 673
Effective length of database: 1073
Effective search space:   722129
Effective search space used:   722129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)