XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCGAGGATCCGCGGAATT
CACTGATCCTTCCTTACTACGGTTATAATATTTCCACCTGCCTTTTGCTT
CTGTGACCATACCCTCCCCTTCAAAAGTGACTGTATCCCTTCAACAGTAT
GCCAAACTAACCCCCCTTGTGTTGGTTGTCATTTTTTGTTGTTACTACAA
TCACGAAGTAAATAATACAATAATGACATTCAACAAATATAATGAATGTT
TTGTGTGTGAGAGAGTTAGTTGATGTATCCTAAGTTTATCTTTGAATGTG
TTTATATAGTGTGGTTCTGCTACAATACACTGATTTCTTTTGCCTTCTCA
TAGTATTGCCTCTGTGTTTGCTAATGGTTAATGTTTTGAAGGGAACAGAA
TTTATGGATTTGACTCACTTTCATTTTTCCCTACCAATGCTTTACTATTC
ATATACACAAGCCTAGACATGAATTGAAACTTCTTGTGTATTGACATTCA
GTTATTAAGTACAGGAGTGCCCAGGTACATATGCATTCACAAAACAGATG
CAAATGTTGGCGTAATAACCTACTCTGAACCCCACCAACAGACTGCTCAT
ATTAAATTACAAAGTGCTACAGACAGTATGTTACAAAGCACCAGCTTCCA
AAGGGACAAGGATGAGTGTTCAAGAGCTTCCAATGCAAGCCAAGGAACTG
ATCTACATTATGAAAAGAGTCCTAAAGTTTATTAAATGTGCAAAGGT

TGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXCTGATTTGATTCAAATAATTTTAGAAACA
AAGTTTTAAGAGATGGTCTTAGTTGCTTTGCTAGAAAGATGCAACAGAAT
TAGAATCAAGAATAGAGCATGCCCACTTCTCATATAGAAATTAAAGGCTG
CATAATAAGAAATAAGCTTTCATAATCAGCATGCACTTCTTAGCATTCAC
AATAGTGTATGGGTTTGGTGTTGTGGTATATGGGATGGATCCCAAGGTGG
GGCAGTCTCTGGATGGCCTTTATTTCAGTCTCTGCTTCACAGTTTCTCCA
TATTTCCTCCCATGAGTATTTTGTTCCCACTTCTAAGAAGGACTGAATCA
TCCATACTTTGGTCTTTCTTCTTCTTGAGATTCATGTGGTCTGTGGATTG
TATCTTGGGCATTCTGACCTTTTAGGCTAATATTTATTTTATCAGTAGTA
CATACCATGTGTGTTCTTCTGTAACTGGGGTATTTCACTCAGGATAATAT
TTTCCTTTTTTTTTTCCTTTTTTTTTTAGGCATAGAAGAAATACATTTAT
TAAAATGTACTTTTAACCATGGATTTGGGGTACAGTTCCCCCTTCCAAAT
TACCCCTATCCTCCTTTTTTCCACCTCCCCTAATTCCCACCCCTTTTTCC
TTCTTTCCTTTTATCACCTCTGTCTTTCTCTTATCCCTCTTTCCCCCCTT
CCCTAGTCGTTTTA

Query= MSMg01no481_j19.b1 MSMg01no481_j19.b1 CHROMAT_FILE:
MSMg01no481_j19.b1 PHD_FILE: MSMg01no481_j19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:02:18 2005
         (707 letters)



>mm_chrX_61594592_61595700
          Length = 1109

 Score = 1299 bits (672), Expect = 0.0
 Identities = 697/708 (98%), Gaps = 6/708 (0%)
 Strand = Plus / Plus

                                                                       
Query: 6   gaattcactgatc----cttccttactacggttataatatttccacctgccttttgcttc 61
           |||||||||||||    |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 gaattcactgatctctgcttccttactacggttataatatttccacctgccttttgcttc 261

                                                                       
Query: 62  tgtgaccataccctccccttcaaaagtgactgtatcccttcaacagtatgccaaactaac 121
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tgtgaccataccctccccttcaaaagtgactgtatcccttcaacagtatgccaaactaac 321

                                                                       
Query: 122 cccccttgtgttggtt--gtcattttttgttgttactacaatcacgaagtaaataataca 179
           ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 cccccttgtgttggttttgtcattttttgttgttactacaatcacgaagtaaataataca 381

                                                                       
Query: 180 ataatgacattcaacaaatataatgaatgttttgtgtgtgagagagttagttgatgtatc 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ataatgacattcaacaaatataatgaatgttttgtgtgtgagagagttagttgatgtatc 441

                                                                       
Query: 240 ctaagtttatctttgaatgtgtttatatagtgtggttctgctacaatacactgatttctt 299
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 442 ctaagtttatctttgaatgtgtttatatagtgtggttctgcaacaatacactgatttctt 501

                                                                       
Query: 300 ttgccttctcatagtattgcctctgtgtttgctaatggttaatgttttgaagggaacaga 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ttgccttctcatagtattgcctctgtgtttgctaatggttaatgttttgaagggaacaga 561

                                                                       
Query: 360 atttatggatttgactcactttcatttttccctaccaatgctttactattcatatacaca 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 atttatggatttgactcactttcatttttccctaccaatgctttactattcatatacaca 621

                                                                       
Query: 420 agcctagacatgaattgaaacttcttgtgtattgacattcagttattaagtacaggagtg 479
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 agcctagacatgaatcgaaacttcttgtgtattgacattcagttattaagtacaggagtg 681

                                                                       
Query: 480 cccaggtacatatgcattcacaaaacagatgcaaatgttggcgtaataacctactctgaa 539
           ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 682 cccaggtacatatgcattcacaaaacaaatgcagatgttggcgtaataacctactctgaa 741

                                                                       
Query: 540 ccccaccaacagactgctcatattaaattacaaagtgctacagacagtatgttacaaagc 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 ccccaccaacagactgctcatattaaattacaaagtgctacagacagtatgttacaaagc 801

                                                                       
Query: 600 accagcttccaaagggacaaggatgagtgttcaagagcttccaatgcaagccaaggaact 659
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 802 accagcttccaaagggacaaagatgagtgttcaagagcttccaatgcaagccaaggaact 861

                                                           
Query: 660 gatctacattatgaaaagagtcctaaagtttattaaatgtgcaaaggt 707
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 862 gatctacattatgaaaagagtcctaaagtttattaaatgtgcaaaggt 909


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 707
Length of database: 1109
Length adjustment: 10
Effective length of query: 697
Effective length of database: 1099
Effective search space:   766003
Effective search space used:   766003
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)