TTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCACAGAATTGCCTTGAGTCATGAAAGGTTGGGGTGTGGAGGCATGGG
GCTTCATTTCTCCCTGTTAAGTCTCGTATTTTACTGTCTCCATAAGGAAG
GTGAGGAAGGAAGCCTCAAGATTACACCAAATATTTTAGTTTCAATTTTG
GTACCCTTCTTCCCCTTAAGTTATGAAGACCTCTGCTTAAAAATGTACTT
ACCTTTATTATTATTATTATTATTATTATTATTATTAGTAGTAGTAGTAG
TAGTAGTAGTAGTAGTAGTATTAAAAATCTAGTTTAGTAAGTATTATAGG
GGGATAGAGGCCATTTTTCCCTGTATGGATATATCAGTTCTGGAAGGCAA
ACTGAGGTCCTTTCTCCAATCAAATAAATCAAGATGGGAGATTGGAGGAC
AAGCTATTTAATCTTCACACTTACAGTTTTGAGAAACAATGACTTCAATG
ACAAACATGGCTAGCACAGCAATTTGTCTCAAAACAGTGTTTTTTATATC
CCGCATTGCATTTCTGTGTCCCCGAATTCATCAGTGGCTAAGTTCTTTAG
GCAAGAACAGCAGTATCTAGCACTGTCCCACCCTTTCATTTCAGGCTACA
AAGCTAAGTATACCCACAGGCTCAAGATTTCCTCCTTTTCTGATATATGT
GCTTGGTCATGAAGGAGACTTCTTGTAATATTTCAACCCTAAACTGAACT
GAG

CTATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXACTCAAAAAATGAAAAGAGAACTAA
CTTCTGGATGATCCATCACTCCCTACTCCTGGTTACATACGCAAAGGAAA
TAAAATCCGTATGTTAAGTGGTATCTGCTTACCCTGCCTTAAGGCAGCAC
TATTCAAAAGAACCAAAAATGAAGGACAGGGAGAAACAACATGAATGTCT
GCTAACTGATAAACATACATATCTATGAATATATATAATATATATGAATA
TATGTTTATATATACAAATATGAATATATCCAGTATAAATATATATGTGT
GTATATATATATGTGCGTGTGTATATACATATTTATTTGCATATACAAGC
ATGTATGTATATATATATACATATATATATATGGATATATATAATGGAAT
TCTACTCAGCTATAAAAAGGATTCAATCTTGTCAATTGTGGAAAGAGATG
AAACTTTAAGTAATTATATCAAATGACAAAACCCTTACACTCAAAGTACC
AGATGATCTCATTCATGTGTGGACTCTAAAATCCCTGACCACACAGTATG
AGACTGTGGAGAATAATGGGGTGTGGCAGTGAGGGTGAGTGGCACTGATG
TGTCAAAGCATGAGCACTAAGTTATAATCAGATAGTACTAAGTAATTCTG
GCATGCTGTTGCACAGCACAGTAATTAA

Query= MSMg01no482_i18.b1 MSMg01no482_i18.b1 CHROMAT_FILE:
MSMg01no482_i18.b1 PHD_FILE: MSMg01no482_i18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:03:29 2005
         (663 letters)



>mm_chrX_8762787_8763849
          Length = 1063

 Score = 1181 bits (611), Expect = 0.0
 Identities = 643/661 (97%), Gaps = 14/661 (2%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcacagaattgccttgagtcatgaaaggttggggtgtggaggcatggggcttcatt 64
           |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacagaagtggcttgagtcatgaaaggttggggtgtggaggcatggggcttcatt 264

                                                                       
Query: 65  tctccctgttaagtctcgtattttactgtctccataaggaaggtgaggaaggaagcctca 124
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 265 tctccctgttaagtctcgtattttactgtctccataaggaagatgaggaaggaagcctca 324

                                                                       
Query: 125 agattacaccaaatattttagtttcaattttggtacccttcttccccttaagttatgaag 184
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 325 agattacaccaaatattttagtttcaattttggtatccttcttccccttaagttatgaag 384

                                                                       
Query: 185 acctctgcttaaaaatgtacttacctttatt-attattattattattattattattatta 243
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 385 acctctgcttaaaaatgtacttacctttatttattattattattattattattattatta 444

                                                                       
Query: 244 gtagtagtagtagtagtagtagtagtagtagtattaaaaatctagtttagtaagtattat 303
           ||||||||||||||||||||||||            ||||||||||||||||||||||||
Sbjct: 445 gtagtagtagtagtagtagtagta------------aaaatctagtttagtaagtattat 492

                                                                       
Query: 304 agggggatagaggccattttt-ccctgtatggatatatcagttctggaaggcaaactgag 362
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 493 agggggatagaggccattttttccctgtatggatatatcagttctggaaggcaaactgag 552

                                                                       
Query: 363 gtcctttctccaatcaaataaatcaagatgggagattggaggacaagctatttaatcttc 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 gtcctttctccaatcaaataaatcaagatgggagattggaggacaagctatttaatcttc 612

                                                                       
Query: 423 acacttacagttttgagaaacaatgacttcaatgacaaacatggctagcacagcaatttg 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 acacttacagttttgagaaacaatgacttcaatgacaaacatggctagcacagcaatttg 672

                                                                       
Query: 483 tctcaaaacagtgttttttatatcccgcattgcatttctgtgtccccgaattcatcagtg 542
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 tctcaaaacagtgttttttatatcccgcattgcatttctgtgtccccgaattcatcagtg 732

                                                                       
Query: 543 gctaagttctttaggcaagaacagcagtatctagcactgtcccaccctttcatttcaggc 602
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 gctaagttctttaggcaagaacagcagtatctagcactgtcccaccctttcatttcaggc 792

                                                                       
Query: 603 tacaaagctaagtatacccacaggctcaagatttcctccttttctgatatatgtgcttgg 662
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 tacaaagctaagtatacccacaggctcaagatttcctccttttctgatatatgtgcttgg 852

            
Query: 663 t 663
           |
Sbjct: 853 t 853


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1063
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1053
Effective search space:   687609
Effective search space used:   687609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)