Query= MSMg01no485_c05.b1 MSMg01no485_c05.b1 CHROMAT_FILE:
MSMg01no485_c05.b1 PHD_FILE: MSMg01no485_c05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:06:58 2005
(408 letters)
>mm_chrX_82333645_82334452
Length = 808
Score = 745 bits (385), Expect = 0.0
Identities = 400/405 (98%), Gaps = 2/405 (0%)
Strand = Plus / Plus
Query: 5 gaattccacagtttg-tttcgtgtgtttttatttggttacagtttggtaatgttttttcc 63
||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccacagtttgattt-gtgtgtttttatttggttacagtttggtaatgttttttcc 263
Query: 64 tttttgtgtggttttattttgttaggcttcatttctttgaggggagttcttgttatattg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tttttgtgtggttttattttgttaggcttcatttctttgaggggagttcttgttatattg 323
Query: 124 agcttttgctttttgaggaagaacttaaagttgggtgtgtggggaggaggaggagatcta 183
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 324 agcttttgctttttgaggaagaacttaaacttgggtgtgtggggaggaggaggagatcta 383
Query: 184 gaaggacttggcagaggagaagaatatgatcaaaatatgttgaaaatttaaaactgtttt 243
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 384 gaaggacttggcagaggagaagaatatgatcaaaatatattgaaaatttaaaactgtttt 443
Query: 244 aaataataaaaattaaaatgaatataaagctaattgctagtccgagattacaatattaca 303
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 444 aaataataaaaattaaaatgaatataaagctaattactagtccgagattacaatattaca 503
Query: 304 attagcagaaagaagtttaaaaaaaaatctgttctgtaaaattaattaaagaggatcata 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 attagcagaaagaagtttaaaaaaaaatctgttctgtaaaattaattaaagaggatcata 563
Query: 364 tatttgagagagaaatttagggcaacataggaagatttggagcaa 408
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tatttgagagagaaatttagggcaacataggaagatttggagcaa 608
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 408
Length of database: 808
Length adjustment: 9
Effective length of query: 399
Effective length of database: 799
Effective search space: 318801
Effective search space used: 318801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no485_c05.g1 MSMg01no485_c05.g1 CHROMAT_FILE:
MSMg01no485_c05.g1 PHD_FILE: MSMg01no485_c05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:06:58 2005
(228 letters)
>mm_chrX_82386366_82386993
Length = 628
Score = 426 bits (220), Expect = e-124
Identities = 226/228 (99%)
Strand = Plus / Minus
Query: 1 tttcagattaaatagaaagatgtagccaaaatgcctggtctctaaagaccaaatactcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tttcagattaaatagaaagatgtagccaaaatgcctggtctctaaagaccaaatactcaa 369
Query: 61 acatgaaagatatgacaggcagattcactgcacgctgcctattcatcacagggacaagcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 acatgaaagatatgacaggcagattcactgcacgctgcctattcatcacagggacaagcg 309
Query: 121 cattcgcaataattattctaacaaaattaccaaaaatgaacttacacaataagtaatcaa 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 tattcgcaataattattctaacaaaattaccaaaaatgaacttacacaataagtaatcaa 249
Query: 181 agtaaaaatgccacttaaaaacaacacttcctttaattataaactcta 228
| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 aataaaaatgccacttaaaaacaacacttcctttaattataaactcta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 228
Length of database: 628
Length adjustment: 9
Effective length of query: 219
Effective length of database: 619
Effective search space: 135561
Effective search space used: 135561
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
