NNNNAATCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCCTGGCATTCCATCCATTGGTAAGCTGTAACTCCAGTTCTG
GGTAATCCAATGGATTCTCTGGCCTCTGTGGCCACTGCACTCACATACAC
ACACCAACAATACACATAAACACACACACACACAAACTTGAAAGTTAAAT
AAACCGTTTAATTTTTCTTAATTTCTATTTTATGTATATAGGTGTTTTGC
CTTCGTATATATCTATATTATCTATATACCATGTGGGTTTTGGGTGCCTA
CAAGGGCAGAAGAAGGCATTGGATCCCAAGGTACTAGCATTACAGTAGGT
TGTAAGCTGCCAAGTAGGTGCTGGAAATTAAACCTGCATCTTCTAAAAGA
GCAGAAAACATTCTTAGCAGGTCATCTACATCTCTAGCCCCCCTAAATAA
ATCTCTTTTTAAAAGGCTAGATGGTGCCTGAGGAACAACTCATAGGGCTG
AGTTCTACCCTACACATTTACAGTCATGCATGAGCATACAGCATCTTCAG
TACATGCTATAAAAATACCGTCCCTGGGTAGGCTGCTTTGCTACACCATG
TACTCACACCATATTGGTGCTCCACAATAGACCTAANGCAATGGAGCTGA
GTGCATGAATCAAAATCTTCCAATCATGAGCCAAAATAAAATCTTACTCA
AGTTGTTTTGTCAGTTAGTGACACAGAGACNAAAAGCTACTN

NNNNCCGATGATATGNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAACTTTTCAGCTGGGGAAC
GAGAGTACCAGTGAGTACAGCTTTACGAGGTGAGTCTGATCTTGAACTTT
CTAACGAAATTCAGGACAGTCTATCAGAAGTAAAGTGGAATATGTTTGGC
CTTGAATTTTTTCTGGTGTTAGGAGCCCTTTTGTTCCTTTTCACATGTTA
TCAAGTGATTAAGATAGGGCTGAAAATTCTAGAGGAAATTCAGGACAATC
TATCAGAAGTAAAGCGGGGAGAGAGAGTAGGAACAAAGAGGAAATATGGT
ACACAAAATAAGTATACAGGCCTTTCCAAGGGTCTTGAACCCGAGGAAAA
GTTAAGGTTAGGTAGGAATACCTGGAGAGAGATTAGAAGAAAAAGAGGAA
AAAGGGAAAAGAAGAAAGATCGATTAGCGGAGGTCTCTAGGAGATACTCG
TCACTAGATGAGCTCGGGGAGCCAGCTCTTAGTAGCTCTGAAGCAGGTGA
AGAATCCTCCTCTGAGGAAACAGACTGGGAGGAAGAAGCAGCCCATTACC
AGCCAGCTAATTGGTCAAGAAAAAAGCCAAAAGCGGCTGGCGAAAGCCAG
CGTACTGGTCAACCTCCCGGCAGCCGGTTTCAAGGTCCGCCCTATGCGGA
GCCCCCGCCCTGCGTAGTGCGTCAGCAATGCGCAAAAGAGGAATGCG

Query= MSMg01no485_f10.b1 MSMg01no485_f10.b1 CHROMAT_FILE:
MSMg01no485_f10.b1 PHD_FILE: MSMg01no485_f10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:07:15 2005
         (580 letters)



>mm_chrX_74616883_74617862
          Length = 980

 Score = 1025 bits (530), Expect = 0.0
 Identities = 570/588 (96%), Gaps = 10/588 (1%)
 Strand = Plus / Plus

                                                                       
Query: 3   cggaattcctggcattc-catccattggtaagc-------tgtaactccagttctgggta 54
           ||||||||||||||| | ||||||||||| |||       |||||||||||||| |||||
Sbjct: 193 cggaattcctggcatccacatccattggttagcaactacctgtaactccagttccgggta 252

                                                                       
Query: 55  atccaatggattctctggcctctgtggccactgcactcacatacacacaccaacaataca 114
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 atccaatggcttctctggcctctgtggccactgcactcacatacacacaccaacaataca 312

                                                                       
Query: 115 cataaacacacacacacaca--aacttgaaagttaaataaaccgtttaatttttcttaat 172
           ||||||||||||||||||||  ||||||||||||||||||||| |||||||||| |||||
Sbjct: 313 cataaacacacacacacacacaaacttgaaagttaaataaaccatttaattttttttaat 372

                                                                       
Query: 173 ttctattttatgtatataggtgttttgccttcgtatatatctatattatctatataccat 232
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 373 ttctattttatgtatataggtgttttgccttcatatatatctatattatctatataccat 432

                                                                       
Query: 233 gtgggttttgggtgcctacaagggcagaagaaggcattggatcccaaggtactagcatta 292
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gtggattttgggtgcctacaagggcagaagaaggcattggatcccaaggtactagcatta 492

                                                                       
Query: 293 cagtaggttgtaagctgccaagtaggtgctggaaattaaacctgcatcttctaaaagagc 352
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 cagtaggttgtaagctgccaagtaggtgctggaaattaaacctgcatcttctaaaagagc 552

                                                                       
Query: 353 agaaaacattcttagcaggtcatctacatctctagcccccctaaataaatctctttttaa 412
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 agaaaacattcttagcaggtcatctacatctctagcccccctaaataaatctctttttaa 612

                                                                       
Query: 413 aaggctagatggtgcctgaggaacaactcatagggctgagttctaccctacacatttaca 472
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 aaggctagatggtgcctgaggaacaactcatagggctgagttctaccctacacatttaca 672

                                                                       
Query: 473 gtcatgcatgagcatacagcatcttcagtacatgctataaaaataccgtccctgggtagg 532
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 gtcatgcatgagcatacagcatcttcagtacatgctataaaaataccgtccctgggtagg 732

                                                           
Query: 533 ctgctttgctacaccatgtactcacaccatattggtgctccacaatag 580
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 ctgctttgctacaccatgtactcacaccatattggtgctccacaatag 780


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 580
Length of database: 980
Length adjustment: 10
Effective length of query: 570
Effective length of database: 970
Effective search space:   552900
Effective search space used:   552900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)