GACTCACTATTTGGAGAGGATCCGCGGAATTCCAATGTACCATGAACTGG
ATATAATTTTATATGATATACATAATTCTCATCCAAAAACATGGATGGAG
GAGACAAAGGATGTGAAGTTTAAGGTTATCATCTACTATATACTGTGACT
CAGGCTAGTCTGGAATGTTAGGAACTCTGTCTTACAATAAATTATAATGA
ACAAGAAACAATATATCAGAAGAATCCCTTTCATTCTTCAGTTTTAGGCA
GCTATTTAACTGAAGCACTAAGACCTAAGACATTATTTGGGAGTTTGAGA
CAGATATAAAATTCTGTGCTTAGCAGATCAGTGACCTGGCCAATACCCAC
TCAAACACTGCAGCCTGCATATTTCCCAGGATGTCCACAGTGACCAAGAA
TACAGGTGAGAATTATGCCCAAATACCTATACCAGTTTGGACACTCACAC
AACCCAGCAGACACAGGACATACACCCAATCCCAGAGTTCTACTACCCTT
TTGTCTCACTTCCCTACTGGGGGCCAGACCAGTGACCTGACACCCACCCA
AATGCTACAGCTTGAAAGCCTCCCAGGAATTACTCAGTAACCAGGGGCAT
AGGAAGTCAGCAGTAAGCAGGTATACAGGAGACATGCTCTACAGGAGACA
AGAGAGGCTTCCACTAACCAGAGACAATACTGGCAGCCTCCAAAAATACC
AACTCTAA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXTCTCCTGAGTAATACCGAATGGCAGGGAAGCACCTGAAAAA
ATGTTCAACATCCTTAATCATCGGGGAAATGCAAATCAAAACAACCCTGA
GATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGAC
AGCAGATGCTTGCGAGGATGTGGAGAAAGAGGAAGACTCCTCCATTACTG
GTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCC
ACAGAAAATTGGACATAGTACTACCGGAGTATCCAGCAATACCTCTCCTG
GGCATATATCCAGAAGATGTTCCAACTGGTAGGAAGGACACATGCTCCAC
TATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCA
GATGCCCTTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACACA
ATGGAGTACTGCTCAGCTATTAAAAAGAATGAAATTATGAAATTCCTAGG
CAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGATAACCCAATCAC
AAAGGAACCCACACAATATGTACTCACAGATAAGTGGATATTAGCTCAGA
AACTGAGGATACCCAAGATATACGATACAATTTGCTAAACGCATGAAACT
CAAGAAGAACGAAGACCAAAGCN

Query= MSMg01no488_h04.b1 MSMg01no488_h04.b1 CHROMAT_FILE:
MSMg01no488_h04.b1 PHD_FILE: MSMg01no488_h04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:11:22 2005
         (633 letters)



>mm_chrX_40853587_40854619
          Length = 1033

 Score = 1158 bits (599), Expect = 0.0
 Identities = 614/619 (99%)
 Strand = Plus / Plus

                                                                       
Query: 15  gaattccaatgtaccatgaactggatataattttatatgatatacataattctcatccaa 74
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 gaattccaatgcaccatgaactggatataattttatatgatatacataattctcatccaa 274

                                                                       
Query: 75  aaacatggatggaggagacaaaggatgtgaagtttaaggttatcatctactatatactgt 134
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaacatggatggaggagacaaaggatgtgaagtttaaggttatcatctactatatactgt 334

                                                                       
Query: 135 gactcaggctagtctggaatgttaggaactctgtcttacaataaattataatgaacaaga 194
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 335 gactcaggctagtctggaatgttagggactctgtcttacaataaattataatgaacaaga 394

                                                                       
Query: 195 aacaatatatcagaagaatccctttcattcttcagttttaggcagctatttaactgaagc 254
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 aacaatatatcagaagaatccctttcattcttcagttttaggcagctatttaactgaagc 454

                                                                       
Query: 255 actaagacctaagacattatttgggagtttgagacagatataaaattctgtgcttagcag 314
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 actaagacctaagacattatttgggagtttgagacagatataaaattctgtgcttagcag 514

                                                                       
Query: 315 atcagtgacctggccaatacccactcaaacactgcagcctgcatatttcccaggatgtcc 374
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 atcagtgacctggccaatacccactcaaacactgcagcctgcatatttcccaggatgtcc 574

                                                                       
Query: 375 acagtgaccaagaatacaggtgagaattatgcccaaatacctataccagtttggacactc 434
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 acagtgaccaagaatacacgtgagaattatgcccaaatacctataccagtttggacactc 634

                                                                       
Query: 435 acacaacccagcagacacaggacatacacccaatcccagagttctactacccttttgtct 494
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 635 acacaacccagcagacacaggacatacaccccatcccagagttctactacccttttgtct 694

                                                                       
Query: 495 cacttccctactgggggccagaccagtgacctgacacccacccaaatgctacagcttgaa 554
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 cccttccctactgggggccagaccagtgacctgacacccacccaaatgctacagcttgaa 754

                                                                       
Query: 555 agcctcccaggaattactcagtaaccaggggcataggaagtcagcagtaagcaggtatac 614
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 agcctcccaggaattactcagtaaccaggggcataggaagtcagcagtaagcaggtatac 814

                              
Query: 615 aggagacatgctctacagg 633
           |||||||||||||||||||
Sbjct: 815 aggagacatgctctacagg 833


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1033
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1023
Effective search space:   637329
Effective search space used:   637329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)