XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTT
GTTTATCTCTGAGCCCCATTTTTTTCTTTTTCTTTTTTTAAAATATTTTT
TATTACATATTTTCCTAAATTACATTTCCAATGCTATCCCAAAAGTCCCC
CATACCCCCCCCCCACTTCCCTACCAACCCATTCCCATTTTTTTGGCCCT
GTCGTTCTCCCGTACTGGGGCATATACAGTTTGCGTGTCCAATGGGCCTC
TCTTTCCAGTGATGGCCGACTAGACCATCTTTTGATACATATGCAGCTAG
AGTCAAGAGCTCCGGTTTACTGGTTAGTTGATAATGTTGTTCCACCTATA
GGGTTGCAGATCCGTTTAGCTTCTTGGGTACTTTCTCTATCTCCTCCATT
GGGAGCCCTGTGATCCATCCAGTAGCTGACTGTGAGCATCCACTTCTGTG
TTTGCTAGGCCCCAGCATAGTCTCATATTAGACAGCTACATCTGGGTCCT
TTCAACAAAATCTTGCTAGTGTATGCAATGGTGTCAGCGTTTGGAAGCTG
ATTATGGGGTGGATCCATGGATATGGCAGTCTCTAGATGGTCCATCCTTT
CGCCTCAGCTCCAAACTTTGTCTTTGTAACTCCTTCCATGGGTGCTTTGT
TCCCAATTCTAAGGAGGGGCATAGGGGTTATTTGATTTTCTGGAGTCCAC
CTTCTTGAGTTCTTTATATATATTGGN

AGTGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXATTTATGAAATGATAAAAGCCAAACATGAAGT
ACGTCAGAATATTGGTTATGTTTTGTTGGTTATGTTTGAGTATAAAATTT
TAAAGTAAAATAATAACCAAACAGACCTAAAATAAACTATAGACCATGAG
TAATATCTACACTGCTAAGAGAGTATTTGCATAGATGGTATATTTGTAAA
AGCTCCCAAATGTACTGGCAATATTATCTTCATAGAAAAATAGACAAATA
ATTTGAACAGATATTTCCACAAATAATAGTCAGTGGTTGAATATGTTGAG
AAATATAAGAAATGAATTCAAACTGAAGTCACTTAATTATGAAAGCTTAA
TTTCTCAAGTGTTTCAGCGTCAATGGTTTACCAAATTAGCATAAACTTTA
AAATATGTAATATTTCAAACTATATGTCATAAACTGCATATATCTTTTAA
CACAGAAACTCTACTGATGGTAATTCTATGAAGCTAATAATTTTAAAGTG
GATATAAAATTCTGAAGTGGCTGATCTATTGCATTCCCTTCAATAAAAGT
ACTAGAAAATATTTATTCATATGAATTAAATGAAGTTATTTTATAAATTT
TTGTGCAATGGCAGGTCCACAAAGAATAACTTTGTGATGTTGATATATGA
TAAGATAACATAAAAAGGTAAGTATATATAATATAAATACATATAA

Query= MSMg01no491_d21.g1 MSMg01no491_d21.g1 CHROMAT_FILE:
MSMg01no491_d21.g1 PHD_FILE: MSMg01no491_d21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:15:06 2005
         (674 letters)



>mm_chrX_42202974_42204047
          Length = 1074

 Score = 1257 bits (650), Expect = 0.0
 Identities = 668/674 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atttatgaaatgataaaagccaaacatgaagtacgtcagaatattggttatgttttgttg 60
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 201 atttatgaaatgataaaagccaaacatgaagtaggtcagaatattggttatgttttgttg 260

                                                                       
Query: 61  gttatgtttgagtataaaattttaaagtaaaataataaccaaacagacctaaaataaact 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttatgtttgagtataaaattttaaagtaaaataataaccaaacagacctaaaataaact 320

                                                                       
Query: 121 atagaccatgagtaatatctacactgctaagagagtatttgcatagatggtatatttgta 180
           |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 321 atagaccatgagtaatatctacactgctaatagagtatttgcatatatggtatatttgta 380

                                                                       
Query: 181 aaagctcccaaatgtactggcaatattatcttcatagaaaaatagacaaataatttgaac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaagctcccaaatgtactggcaatattatcttcatagaaaaatagacaaataatttgaac 440

                                                                       
Query: 241 agatatttccacaaataatagtcagtggttgaatatgttgagaaatataagaaatgaatt 300
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agatatttccacaaataataatcagtggttgaatatgttgagaaatataagaaatgaatt 500

                                                                       
Query: 301 caaactgaagtcacttaattatgaaagcttaatttctcaagtgtttcagcgtcaatggtt 360
           |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cctactgaagtcacttaattatgaaagcttaatttctcaagtgtttcagcgtcaatggtt 560

                                                                       
Query: 361 taccaaattagcataaactttaaaatatgtaatatttcaaactatatgtcataaactgca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taccaaattagcataaactttaaaatatgtaatatttcaaactatatgtcataaactgca 620

                                                                       
Query: 421 tatatcttttaacacagaaactctactgatggtaattctatgaagctaataattttaaag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tatatcttttaacacagaaactctactgatggtaattctatgaagctaataattttaaag 680

                                                                       
Query: 481 tggatataaaattctgaagtggctgatctattgcattcccttcaataaaagtactagaaa 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tggatataaaattctgaagtggctgatctattgcattcccttcaataaaagtactagaaa 740

                                                                       
Query: 541 atatttattcatatgaattaaatgaagttattttataaatttttgtgcaatggcaggtcc 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 atatttattcatatgaattaaatgaagttattttataaatttttgtgcaatggcaggtcc 800

                                                                       
Query: 601 acaaagaataactttgtgatgttgatatatgataagataacataaaaaggtaagtatata 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 acaaagaataactttgtgatgttgatatatgataagataacataaaaaggtaagtatata 860

                         
Query: 661 taatataaatacat 674
           ||||||||||||||
Sbjct: 861 taatataaatacat 874


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 674
Length of database: 1074
Length adjustment: 10
Effective length of query: 664
Effective length of database: 1064
Effective search space:   706496
Effective search space used:   706496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)