Query= MSMg01no494_a01.b1 MSMg01no494_a01.b1 CHROMAT_FILE:
MSMg01no494_a01.b1 PHD_FILE: MSMg01no494_a01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:44 2005
(619 letters)
>mm_chrX_106090839_106091856
Length = 1018
Score = 1160 bits (600), Expect = 0.0
Identities = 612/616 (99%), Gaps = 1/616 (0%)
Strand = Plus / Plus
Query: 4 ggaattcatcatatattccaggctaacctcagatttcaattatccttctttcctctgaga 63
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcatcatatagtccaggctaacctcagatttcaattatccttctttcctctgaga 263
Query: 64 ttatggccacataccaccatattactctttgttttgtggttttgtatgggattttactgc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ttatggccacataccaccatattactctttgttttgtggttttgtatgggattttactgc 323
Query: 124 attatttttcttttgatgatttacacattttttttttttctgagtaagaagggtggttca 183
||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 324 attatttttcttttgatgatttacaca-tttttttttttctgaataagaagggtggttca 382
Query: 184 gaggagatttttctagtgatgtctggggagtaccttctattttttttctctcaaagtgat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gaggagatttttctagtgatgtctggggagtaccttctattttttttctctcaaagtgat 442
Query: 244 acttgttttaagaatgtttttttttctattcaatctcctgtttctgttccctaactagac 303
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 acttgttttaagaatttttttttttctattcaatctcctgtttctgttccctaactagac 502
Query: 304 ttttatatgtagttctctaactcttgtcgaatttggagattctacattcctttgaaaaat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ttttatatgtagttctctaactcttgtcgaatttggagattctacattcctttgaaaaat 562
Query: 364 ctgctcaattgtgcgattttgcttagtatcaggcattgatccagaaaggagtttcagatg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ctgctcaattgtgcgattttgcttagtatcaggcattgatccagaaaggagtttcagatg 622
Query: 424 gttactttcataaggtcataaggcacagaatgttccaaccctccaaccttctttggatcc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 gttactttcataaggtcataaggcacagaatgttccaaccctccaaccttctttggatcc 682
Query: 484 ctttattccctgcaaattggaagcattcccactctcagctgctactctcaaattgatcaa 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 ctttattccctgcaaattggaagcattcccactctcagctgctactctcaaattgatcaa 742
Query: 544 atgatatttccagtgagcaaatattagctctttgggagcattcaagttctgaaggtatta 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 atgatatttccagtgagcaaatattagctctttgggagcattcaagttctgaaggtatta 802
Query: 604 catgctttgtagctct 619
||||||||||||||||
Sbjct: 803 catgctttgtagctct 818
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 619
Length of database: 1018
Length adjustment: 10
Effective length of query: 609
Effective length of database: 1008
Effective search space: 613872
Effective search space used: 613872
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no494_a01.g1 MSMg01no494_a01.g1 CHROMAT_FILE:
MSMg01no494_a01.g1 PHD_FILE: MSMg01no494_a01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:44 2005
(469 letters)
>mm_chrX_106304056_106304926
Length = 871
Score = 839 bits (434), Expect = 0.0
Identities = 457/470 (97%), Gaps = 11/470 (2%)
Strand = Plus / Minus
Query: 1 ttacaaaaactaaaaacaaaacagagctaagagtcagaagagtgaagagggcagaaaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 ttacaaaaactaaaaacaaaacagagctaagagtcagaagagtgaagagggcagaaaagg 731
Query: 61 aagaaaggctgaagaagggaggatagaaggagagggagcaagggaaggaaggagagagga 120
||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 730 aaggaaggctgaagaagggaggataga---------agcaagggaaggaaggagagagga 680
Query: 121 tggagggagattgggactcttccctcaagagaaagattcacttacaatggaaacaagtaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 tggagggagattgggactcttccctcaagagaaagattcacttacaatggaaacaagtaa 620
Query: 181 caggcctctcttctgtgctaatattcgtatttacaaacaaaacaagtaacttgaagatct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 caggcctctcttctgtgctaatattcgtatttacaaacaaaacaagtaacttgaagatct 560
Query: 241 tgtgaaaccacgtctataatgactaagaacacaggcaaatttttcatttatataaaagag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tgtgaaaccacgtctataatgactaagaacacaggcaaatttttcatttatataaaagag 500
Query: 301 gaaagacat-tttttttcagctaacaattttaaccaattattgtggtgctggtgaaaagt 359
||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 499 gaaagacatatttttttcagctaacaattttaagcaattattgtggtgctggtgaaaagt 440
Query: 360 ttccttctttcaataaaattcacagtagttattattactcatttaaaaa-aaaaagtcta 418
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 439 ttccttctttcaataaaattcacagtagttattattactcatttaaaaataaaaagtcta 380
Query: 419 ggcattccctaggatgcaagcttacggtcttttatttccacaaggaatgg 468
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ggcattccctaggatgcaagcttacggtcttttatttccacaaggaatgg 330
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 871
Length adjustment: 10
Effective length of query: 459
Effective length of database: 861
Effective search space: 395199
Effective search space used: 395199
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
