GCGGAGATCTXXXXXXXXXXXXXXXXXXXXXXXXXXAATTCAAAGAGGAT
CCGCGGAATTCTTTGTTTCTATCTGAGCCCTATTTTTTAATGGAGTTATT
TGATTTTCTGGAGTCCACTTTCTTGAGTTCTTTATATATATTGGATATTA
GTCCCCTATCCTATTTGGGATAGGTAAATATCCTTTCCCAATCTGTTGGT
GGCCTTTTTGTTTTATTGACGGTGTCTTTTGCCTTGCAGAAGCTTTGCAA
TTTTATGAGGTCCCATTTATTGATTCTTGATCTTACAGCACAAGCCATTG
CTGTTCTATTCAGGAATTTTTCCCTTGTACCCATATCTTCAAGGCTTTTC
CCTACTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGGAGTTC
CTTAATCCACTTAGATTTGACCTTAGTACAAGGAGATAGGAATGGATCAA
TTCGCATTTTTCTACATGATAACCGCCAGTTGTGCCAGCACCATTTGTTG
AAAATGCTGTCTTTTTTCCACTGGGTGGTTTTAGCTCCCTTGTCAAAGAT
CAAGTGACCATAGGTGTGTGGGTTCATCTCTGGGTCTTCAATTCTGTTCC
ATTGGTCTACTTGGCTGTCACTATACCAATACCATGCAGTTTTGATCACA
ATTGTTCTGTAGTACAGTTTTAGGTCAAGCATGGTGATTCCACCAGAGCG
TCTTTTATCCTTGAGAAGAAGTTTTGCTATCCTAGGTN

AGGACGCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXTTACAAAAAGAATTCAATAAAGAGATAAAAATACT
GAAAAAAAAACATACTAAAATAATGAGACTGAAAAAAAAATAAAAAATAA
ATCACATAAAAGTCAGTCAAAAACCCACCAATAAAATGGGTCCTCTAGAA
AACAAAGTACCAGAGTTTGAAGACAAAAGGTTAAAATGGGTGTGTAAATA
AATGACAATGATTGCTTTTTAAAGAATGAAAGGAAGACAACATGAATTCC
ATAAATGGAGCATGAAAGAAACTTTTTAGTTATGAAAAGGTAAAACTTAA
GAATTATTGTGATAGGAGAACAATTTTATGTAAAAGAAATATAAAATTAT
TTCAATAAAATCATAGAGGAAATGTTTTCAAATATAGGGAAAGAGAAACT
CATGTGGATAACAGAGGCACAAAACATAAATCAGGCAGGTCAAGAAGATA
AACCAGCTATGTTATAGTTAAACCACTGAATATATAGTAAAACTAATGTA
TATTAAACCCTGCAAAAGAAATGGGACAGGCCACATAGAAAGGAAGGCTC
ATAAGAATAACTGACAACTTTTCAATCAAAGTATTAAACAGAAGAAAGTT
TTGAAATAATGTACTTCCAATTCTGAAAGATAACTAGTTCAATCCCAGCC
TGATACATCTGACAAAATTTTCTATCATAATTGAAAGTGAAAGGAAAAC

Query= MSMg01no496_c05.g1 MSMg01no496_c05.g1 CHROMAT_FILE:
MSMg01no496_c05.g1 PHD_FILE: MSMg01no496_c05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:21:22 2005
         (670 letters)



>mm_chrX_129238548_129239617
          Length = 1070

 Score =  944 bits (488), Expect = 0.0
 Identities = 508/518 (98%), Gaps = 6/518 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   caataaagagataaaaatactgaaaaaaaaacatactaaaataatgagactgaaaaaaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
Sbjct: 512 caataaagagataaaaatactgaaaaaaaaacatactaaaataatgagactgaaaa---- 457

                                                                       
Query: 61  ataaaaaataaatcacataaaagtcagtcaaaaacccaccaataaaatgggtcctctaga 120
             | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 --acaaaataaatcacataaaagtcagtcaaaaacccaccaataaaatgggtcctctaga 399

                                                                       
Query: 121 aaacaaagtaccagagtttgaagacaaaaggttaaaatgggtgtgtaaataaatgacaat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 aaacaaagtaccagagtttgaagacaaaaggttaaaatgggtgtgtaaataaatgacaat 339

                                                                       
Query: 181 gattgctttttaaagaatgaaaggaagacaacatgaattccataaatggagcatgaaaga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 gattgctttttaaagaatgaaaggaagacaacatgaattccataaatggagcatgaaaga 279

                                                                       
Query: 241 aactttttagttatgaaaaggtaaaacttaagaattattgtgataggagaacaattttat 300
           ||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 aacttgtaagtcatgaaaaggtaaaacttaagaattattgtgataggagaacaattttat 219

                                                                       
Query: 301 gtaaaagaaatataaaattatttcaataaaatcatagaggaaatgttttcaaatataggg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 gtaaaagaaatataaaattatttcaataaaatcatagaggaaatgttttcaaatataggg 159

                                                                       
Query: 361 aaagagaaactcatgtggataacagaggcacaaaacataaatcaggcaggtcaagaagat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 aaagagaaactcatgtggataacagaggcacaaaacataaatcaggcaggtcaagaagat 99

                                                                       
Query: 421 aaaccagctatgttatagttaaaccactgaatatatagtaaaactaatgtatattaaacc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98  aaaccagctatgttatagttaaaccactgaatatatagtaaaactaatgtatattaaacc 39

                                                 
Query: 481 ctgcaaaagaaatgggacaggccacatagaaaggaagg 518
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 38  ctgcaaaagaaatgggacaggccacatagaaaggaagg 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 670
Length of database: 1070
Length adjustment: 10
Effective length of query: 660
Effective length of database: 1060
Effective search space:   699600
Effective search space used:   699600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)