GGGGNNATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCTCAATTTCGATTTCCAAAGGAGCAGAGTCACTTTGCA
ATCCCACCAACAATAAATAAGAGTACCTCTTCCCCACATCCTTACTAACA
TTGTTCTCAGCTATTCTGTTCATCTTAGCCTTTCTGAAAGGGGTATGATA
AAATCGTGAAGCATTATTGGTTTCCCTAAATGCTGAGAAAATTCAACAGG
TTTTGATGTATTTCTTGGCTATTTTAATAAATCTTCTATTGCAAACTCTC
TGTTTACATCCGTACCCCAAGTATTTTAATGGATTTGTTTTCTTTTTTTT
AGGTATTTATTTCATTTACACTTGCAATGCTATCACAAAAGTCCCCCACA
GGCTCCCCCACCTACTCCCCCACCCACCCACTCCCACTTTTTGGCCCTGA
CGTTCCCTTGTACTGGGGCATATAAAGTTTGCACAACCAATGGGCCTCTC
TTTCCACTGATGGCCGACTAGGCCATCTTCTGATACATATGCAGCTAGAG
ACATGAACTCCAGGGGGTACTGGTTAGTTCATAATGTTGTTCCACCTATA
GGGTTGCAGATCCCCCCAGCTCCTCCATTGGGGGCACTGTGATCCATCCA
ATAGCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGCCCAGGCATAGT
CTCACAAGAGACAGCTATATCTGGGTCCTTTCAGCAAATCTTGGCTGGGG

NAAGACCGAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAATCCAGAAAATGTGTA
TGTTGTTACACCTCCTACTCAATTGCATAGCCCTTTTTCTTAAAGGTAAC
TAGATCTCATTAGTAAAATTAAAACTATCTTCTCAAAATAATTTTCTTTG
TTTGACTTGCCTAGAAATTCTACCTAAATTGTCTTATGCTGCTTAAAGCT
TTATAGATGTAGTGGAGGCTCAGTCAAAGAAGCATAGTCCTTTATAGTAT
ATAGTAGCAACAGAGGAGATTGTTATGTGTCTGTACACAATGTTTGTGAA
ATTGATGTGAAATGTATATATATACTTTTAATAAATATTCCCCAGAGAAA
GCAATCTTATGAACACACACACACACACACACACACAAACACAAACACAA
ACACACACAAGCAAACACATTTATATTTTGGGGCTACTTAATAAAGCAGG
AGATCACACATCAATATCTCTCAAATGTTTGCAATTAAGCAAAGCAGCTT
TAGAAAAGGAAATCACTAACATTAAAAGTAAGGGACATAATGTGCAGACT
ATAAATTGAAAATCTTGATCAGAAACATTTTGTTGATAGGAACTAAGTTA
GCTAGGAATAGAGCCAAAATTTCGGGTTTAGAATGCTTCCAGCCACTGTG
CAGTTGTAGTGTATTTATACACCTCTATATTTAAACACAGGTGGTAATTN

Query= MSMg01no496_g02.g1 MSMg01no496_g02.g1 CHROMAT_FILE:
MSMg01no496_g02.g1 PHD_FILE: MSMg01no496_g02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:21:41 2005
         (609 letters)



>mm_chrX_40773558_40774566
          Length = 1009

 Score = 1162 bits (601), Expect = 0.0
 Identities = 608/611 (99%), Gaps = 2/611 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaatccagaaaatgtgtatgttgttacacctcctactcaattgcatagccctttttctta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 aaatccagaaaatgtgtatgttgttacacctcctactcaattgcatagccctttttctta 258

                                                                       
Query: 61  aaggtaactagatctcattagtaaaattaaaactatcttctcaaaataattttctttgtt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 aaggtaactagatctcattagtaaaattaaaactatcttctcaaaataattttctttgtt 318

                                                                       
Query: 121 tgacttgcctagaaattctacctaaattgtcttatgctgcttaaagctttatagatgtag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tgacttgcctagaaattctacctaaattgtcttatgctgcttaaagctttatagatgtag 378

                                                                       
Query: 181 tggaggctcagtcaaagaagcatagtcctttatagtatatagtagcaacagaggagattg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tggaggctcagtcaaagaagcatagtcctttatagtatatagtagcaacagaggagattg 438

                                                                       
Query: 241 ttatgtgtctgtacacaatgtttgtgaaattgatgtgaaatgtatatatatacttttaat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ttatgtgtctgtacacaatgtttgtgaaattgatgtgaaatgtatatatatacttttaat 498

                                                                       
Query: 301 aaatattccccagagaaagcaatcttatgaacacacacacacacacacacacaca--aac 358
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||
Sbjct: 499 aaatattccccagagaaagcaatcttatgaacacacacacacacacacacacacacaaac 558

                                                                       
Query: 359 acaaacacaaacacacacaagcaaacacatttatattttggggctacttaataaagcagg 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 acaaacacaaacacacacaagcaaacacatttatattttggggctacttaataaagcagg 618

                                                                       
Query: 419 agatcacacatcaatatctctcaaatgtttgcaattaagcaaagcagctttagaaaagga 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 agatcacacatcaatatctctcaaatgtttgcaattaagcaaagcagctttagaaaagga 678

                                                                       
Query: 479 aatcactaacattaaaagtaagggacataatgtgcagactataaattgaaaatcttgatc 538
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 aatcactaacattaaaagtaagggacataatgtgcagactataaattgaaaatcttgatc 738

                                                                       
Query: 539 agaaacattttgttgataggaactaagttagctaggaatagagccaaaatttcgggttta 598
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 739 agaaacattttgttgataggaactaagttagctaggaatagagccaaaatttcaggttta 798

                      
Query: 599 gaatgcttcca 609
           |||||||||||
Sbjct: 799 gaatgcttcca 809


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 609
Length of database: 1009
Length adjustment: 10
Effective length of query: 599
Effective length of database: 999
Effective search space:   598401
Effective search space used:   598401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)