NCCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCAAGATATCTTTAATCTATCTATATAGTAGCTTCTAGGTCAAC
CAAGATTGCATAGGGAGATCTGTCTTATGAAAAGAAAATCACATTTATAT
TATTGTTCAAATATTTGTATAATATATAACTTTTATTAAGACACAAATAC
TAATCATGCATTTAAGCTTTGTGAACTTGCTGATAATATTAACATTTAAT
AAAAGGGTCAAATTTTTATTTTTATCTTAAATCACTGGAAGAATGTAAAG
ATAGCCGTGAGTAAATACTCCTCCTTCCCCCTTTTCGTATTGTGTATTCA
CAACCTATAAAGCAGGCTGCCCAAAACTTTGTGGTTCATGCTGACTTCAC
ATTCTTGGCATGCCTCCTGTTACAGTTTTCTGAATGTGTATTATGGTCAT
AAATCTCAATCCAAAATTAGTAAGTCTCTCCTGTTAAATCTAAATTAATA
ATAGGTATATAAGAATTGAAGGGAGGGAGGATTCTCTATATCTGATTTCT
TAGACTAAGGAAAAACTGATAAAATCTGACAGCAATGGGACTGGGGTGAT
GGTTCAATGGTGAAGGTCATCCCATAGTATTCATGTTGGGCAGTTCACAT
ATCCGAACTCCAGTTTTAAAGGATATAGCACTCTGGGCTTTTTTTTATAT
AGTAATAAATAAGTGAATCATTTTGAGAAGAGCAAACNAACTTTAATTTT
TAGACATATTAAGCTGAAGAAAACAAAGTCTTT

TCAATTATCGAAGCCGAGATAGCCTTTTCAAAAAAGGAGTGGAACAAGTT
TCCCAAGAAGCGGGATACACCAGACCACTAGTTAAAAACTAAAGTAGCGG
AGATTGCGGATGTTATACCTTAGGGCGAAGTCCCCTCTTCCCCTGCCCCC
GGACATCGTTCGGCGTGCATTTCACAGGAAAAAAAAACAGCCGACAAGAC
AGCTCCATATTAGATGGCCAGATGACCATTATAGTCCCCCGCAACAAGTA
ACATAGGGGAGCAAAATATCCTTCATCCCTCCACGTATAAACACGACTAT
ATACTAATAACCATCAATAAATAAATGACGAGGAATAATCGGTAATAACT
ACTTACTCTAATATACCTTCCTCGCCGGGCTCTTACTCTGCACCAACCTC
GTTTCCCCGCGCCTAAATAGATCATTACGAATACTGTCTAGGACAAATAT
TATTTGTCGAATTAATTCACTGCACATCATTCCCTTCCCTATTTTTAGCA
CATGTTACAGTCACTGCAGATCTCATCAGTGTAATATCCTGATATTATCC
GCCACCCATCTACTCATCCTACCCCCCTCCATATTCCTCACTTCTTATCT
GCGCTCATTCCCTTAACCCTCACCTGCCCGAACAAGGGCTCCTATACTAC
CGACTCGATTGCATTGCCCGCGGGAACGCGTTAACCATAAACGAAAGCCA
CAACCCACTTTATTTCCCACCCCAAGAGGGCCGTTAAATTTAAGAGCTTA
TCTCTATATAAAGC

Query= MSMg01no496_p14.b1 MSMg01no496_p14.b1 CHROMAT_FILE:
MSMg01no496_p14.b1 PHD_FILE: MSMg01no496_p14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:22:29 2005
         (657 letters)



>mm_chrX_111432337_111433396
          Length = 1060

 Score = 1253 bits (648), Expect = 0.0
 Identities = 656/660 (99%), Gaps = 3/660 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   atctatctatatagtagcttctaggtcaaccaagattgcatagggagatctgtcttatga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860 atctatctatatagtagcttctaggtcaaccaagattgcatagggagatctgtcttatga 801

                                                                       
Query: 61  aaagaaaatcacatttatattattgttcaaatatttgtataatatataacttttattaag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 aaagaaaatcacatttatattattgttcaaatatttgtataatatataacttttattaag 741

                                                                       
Query: 121 acacaaatactaatcatgcatttaagctttgtgaacttgctgataatattaacatttaat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 acacaaatactaatcatgcatttaagctttgtgaacttgctgataatattaacatttaat 681

                                                                       
Query: 181 aaaagggtcaaatttttatttttatcttaaatcactggaagaatgtaaagatagccgtga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 aaaagggtcaaatttttatttttatcttaaatcactggaagaatgtaaagatagccgtga 621

                                                                       
Query: 241 gtaaatactcctccttcccccttttcgtattgtgtattcacaacctataaagcaggctgc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gtaaatactcctccttcccccttttcgtattgtgtattcacaacctataaagcaggctgc 561

                                                                       
Query: 301 ccaaaactttgtggttcatgctgacttcacattcttggcatgcctcctgttacagttttc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ccaaaactttgtggttcatgctgacttcacattcttggcatgcctcctgttacagttttc 501

                                                                       
Query: 361 tgaatgtgtattatggtcataaatctcaatccaaaattagtaagtctctcctgttaaatc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tgaatgtgtattatggtcataaatctcaatccaaaattagtaagtctctcctgttaaatc 441

                                                                       
Query: 421 taaattaataataggtatataagaattgaagggagggaggattctctatatctgatttct 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 taaattaataataggtatataagaattgaagggagggaggattctctatatctgatttct 381

                                                                       
Query: 481 tagactaaggaaaaactgataaaatctgacagcaatgggactggggtgatggttcaatgg 540
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tagactaaggaaagactgataaaatctgacagcaatgggactggggtgatggttcaatgg 321

                                                                       
Query: 541 tgaaggtcatcccatagtattcatgttgggcagttcacatatccgaactccagttttaaa 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tgaaggtcatcccatagtattcatgttgggcagttcacatatccgaactccagttttaaa 261

                                                                       
Query: 601 ggatatagcactctgggctttttttt---atatagtaataaataagtgaatcattttgag 657
           ||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||
Sbjct: 260 ggatatagcactctgggcttttttttttaatatagtaataaataagtgaatcattttgag 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1060
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1050
Effective search space:   679350
Effective search space used:   679350
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)