NNNNAAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCTCAAGTACTTCTGGTTCCAAGTATTTTACAAAAGAGAT
ACTCATTCTACCTTCATATTTAGATTTTTCCTTTTACTGTTCACAGTCTT
CACCACTCCATTTTTATGTTCCCTTCCATGTATTGAAAATAGAACTTAGG
ATATCACCTCCAAGGCTTCCTTCATCCTCAGTCGCCATAGTAAAGAACTA
CTAAGTTTTGCAAATCATTTCCTCACTATTTCTCAGCTCTTCTCCTTGTA
TGTGTGCCATACTATATGTGTGCATGTTCAGAAAACACTTCTGTAACATT
GTTCTTAAAAATTATAATTAGCCCCCTAAATGGTTTAGATGTCTCCAATC
TTTCCTTTTAAGCTTTCATGAAGAAAGCCTATTTTGTTTATTTAGCTATA
TATTTATTTTATGTATATGAGTACACTGTAGCTGTCTTCATGCACACCAA
AGGAGGGCATCTCAGATCCCATTATGGTTTTGAGCCACCATGTGGTTTCT
GGAAATTGAACTCAGGACCTCTGAAAGAGCAGACAGTGCTCTTGACCACT
GAGCCATCTCTCTGAAATCCTATTCTGTTAACAACTTACTTCTTTTTGTT
GGCTTTCTACTGTGCATTGTCAAAATTCAACCCATTCCTGTGTGCATGCC
AAANGTTGATGTTTGGTGCCTTTTTTATCTTATGCTTTGATGCAGCCTCT
CTCACTG

NTTTCAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXTACTAAAAAAGATCATGGCTGAAATAAATTGAAATAA
ATACCACATTCCAAGGATTAAATTGCATTAAGGTGATATATGATATATGA
TATATATATATATATATATATATATATATATATATATATATATATATATA
TATATATATATATATCGCGCGTGTGTTTTTGTTTTGAGGGAGAGATTTTT
TTTTTTTTTTATCTAAAAAACTGCGCGTGTGTGTATATATATATATATAT
ATATACAGACGCGTTTGCGTGCTTTAGACACCCCCGCACACGCGGGGGGG
GGGAGAGATATATATATATACACATCTNTGTTCCTTGTTTGTTTTGCCTT
TGTGTGTTAATGTTGGGCGCCCCCCTTTTTTTTTTTGCTATTAATGTTTA
ATCTTTCTTTCCTTATTATTTCCCTGTTTTACATTACTTTTTTTTTTCGT
CTCTATTACTCCTTCTTCTTCTTACCTTTTCCACGATATTTTTTTACATT
ATTTTTATCATTTCCCTATTTCTTCTTCGCCTATCTATCTCTCCCCACCT
TTCTTTTATTGGGATTTTTCCCTTACCCCAATTTTTTTATACGTTCCTTT
TCCTTCTTATCAAGAAAACCCACGTCGTTTTTTTTTTTTTTTTTTTATAC
ACGAAATGACCCTCGTGCGTCTACCTTACCATGTATGCTTCCCTCCACTA
TATTTATCTATTTTGTATCTGTTTCCTGACTTAACACTCTATTCTACTCA
CCTCATTTTAG

Query= MSMg01no497_l13.b1 MSMg01no497_l13.b1 CHROMAT_FILE:
MSMg01no497_l13.b1 PHD_FILE: MSMg01no497_l13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:23:30 2005
         (650 letters)



>mm_chrX_48381359_48382408
          Length = 1050

 Score = 1224 bits (633), Expect = 0.0
 Identities = 642/645 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctcaagtacttctggttccaagtattttacaaaagagatactcattctaccttca 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcaagtacttctggttccaagtattttacaaaagagatactcattctaccttca 264

                                                                       
Query: 65  tatttagatttttccttttactgttcacagtcttcaccactccatttttatgttcccttc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tatttagatttttccttttactgttcacagtcttcaccactccatttttatgttcccttc 324

                                                                       
Query: 125 catgtattgaaaatagaacttaggatatcacctccaaggcttccttcatcctcagtcgcc 184
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 325 catgtattgaaaatagaacttaggatatcacctccaaggcttccttcatcctcagttgcc 384

                                                                       
Query: 185 atagtaaagaactactaagttttgcaaatcatttcctcactatttctcagctcttctcct 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atagtaaagaactactaagttttgcaaatcatttcctcactatttctcagctcttctcct 444

                                                                       
Query: 245 tgtatgtgtgccatactatatgtgtgcatgttcagaaaacacttctgtaacattgttctt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tgtatgtgtgccatactatatgtgtgcatgttcagaaaacacttctgtaacattgttctt 504

                                                                       
Query: 305 aaaaattataattagccccctaaatggtttagatgtctccaatctttccttttaagcttt 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aaaaattataattagccccctaaatggtttagatgtctccaatctttccttttaagcttt 564

                                                                       
Query: 365 catgaagaaagcctattttgtttatttagctatatatttattttatgtatatgagtacac 424
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 565 catgaagaaagcctattttgtttatttagttatatatttattttatgtatatgagtacac 624

                                                                       
Query: 425 tgtagctgtcttcatgcacaccaaaggagggcatctcagatcccattatggttttgagcc 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tgtagctgtcttcatgcacaccaaaggagggcatctcagatcccattatggttttgagcc 684

                                                                       
Query: 485 accatgtggtttctggaaattgaactcaggacctctgaaagagcagacagtgctcttgac 544
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 685 accatgtggtttctggaaattgaactcaggacctctgaaagagcagccagtgctcttgac 744

                                                                       
Query: 545 cactgagccatctctctgaaatcctattctgttaacaacttacttctttttgttggcttt 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 cactgagccatctctctgaaatcctattctgttaacaacttacttctttttgttggcttt 804

                                                        
Query: 605 ctactgtgcattgtcaaaattcaacccattcctgtgtgcatgcca 649
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 ctactgtgcattgtcaaaattcaacccattcctgtgtgcatgcca 849


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1050
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1040
Effective search space:   665600
Effective search space used:   665600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)