Query= MSMg01no499_b05.b1 MSMg01no499_b05.b1 CHROMAT_FILE:
MSMg01no499_b05.b1 PHD_FILE: MSMg01no499_b05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:25:22 2005
(654 letters)
>mm_chrX_155697351_155698404
Length = 1054
Score = 1118 bits (578), Expect = 0.0
Identities = 623/654 (95%), Gaps = 26/654 (3%)
Strand = Plus / Plus
Query: 24 gaattcagaaatccttaatggattacttaaagttgcaagtaccttttttt-gatatttga 82
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 198 gaattcagaaatccttaatggattacttaaagttgcaagtaccttttttttgatatttga 257
Query: 83 ctatttagggggtagatatcaagaaattatggttct------------------------ 118
|||||||||||||||||||||||||||||| ||||
Sbjct: 258 ctatttagggggtagatatcaagaaattattcttctacaattccaatctatcaattattc 317
Query: 119 -tctacaattccattgctactgcttccagggacaaatatcactagatgacaagcctaact 177
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 ttctacaattccattgctactgcttccagggacaaatatcactagatgacaagcctaact 377
Query: 178 taaagtatatggttttccttaattagtggaaatgctaatctaaataggaacaatgtacaa 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 taaagtatatggttttccttaattagtggaaatgctaatctaaataggaacaatgtacaa 437
Query: 238 agtaataaaatgaagggtatttttgctctttaaaaatggccacagtgcaatgtattgtat 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 agtaataaaatgaagggtatttttgctctttaaaaatggccacagtgcaatgtattgtat 497
Query: 298 atgatataaacaatgtttttatacaatgtgtggtatagaaatagtcacctgacttccttt 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 atgatataaacaatgtttttatacaatgtgtggtatagaaatagtcacctgacttccttt 557
Query: 358 aaataacgaatacctaacagacactgaaaactactatatttgataacagaagacaagaac 417
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 558 aaataacgaatacctaacaggcactgaaaactactatatttgataacagaagacaagaac 617
Query: 418 tttgtattgtagatcatctttggtaaacatggggccatttttaacctcaaaaattatgca 477
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 618 tttgtattgtagatcatctttggtgaacatggggccatttttaacctcaaaaattatgca 677
Query: 478 gtaatccttagtgtgatatagcatagggtttctacagtgtttctagtatgtattatatag 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 gtaatccttagtgtgatatagcatagggtttctacagtgtttctagtatgtattatatag 737
Query: 538 ggttcttaagttttatctgctgggaaaatgttttattcatctatgatgattgacttggaa 597
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 ggttcttaagttttatcagctgggaaaatgttttattcatctatgatgattgacttggaa 797
Query: 598 cacgtgttttagtaggttcttttctgcttcctgtttcatttttaccgctttgca 651
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 cacgtgttttagtaggttcttttctgcttcctgtttcatttttaccgctttgca 851
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1054
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1044
Effective search space: 672336
Effective search space used: 672336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no499_b05.g1 MSMg01no499_b05.g1 CHROMAT_FILE:
MSMg01no499_b05.g1 PHD_FILE: MSMg01no499_b05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:25:22 2005
(434 letters)
>mm_chrX_155750809_155751642
Length = 834
Score = 818 bits (423), Expect = 0.0
Identities = 429/431 (99%)
Strand = Plus / Minus
Query: 4 gctagtgtgtgctagagggagaccctgtcttaaaacaataacggcaacaataaaaacaaa 63
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 834 gctagtgtgtgctagagggagaccctgtcttaaaagaataacggcaacaataaaaacaaa 775
Query: 64 aagaggagactatataaaggggatagcttgtcatttttaattatttaaaaaacaagagag 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 aagaggagactatataaaggggatagcttgtcatttttaattatttaaaaaacaagagag 715
Query: 124 ctgggaatgcagtttagcaatagtgtgcttgctcatcgtgccctgaagccctaagctcaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 ctgggaatgcagtttagcaatagtgtgcttgctcatcgtgccctgaagccctaagctcaa 655
Query: 184 cctccctattgacataaaacaaaaccaaccaatctgctcagacacctaccccagtagggt 243
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 654 cctccctattgacataaaacaaaaacaaccaatctgctcagacacctaccccagtagggt 595
Query: 244 gacaataaagggcagtcttaaaagataaagtgagtatgaacactgccaatttactaaggt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 gacaataaagggcagtcttaaaagataaagtgagtatgaacactgccaatttactaaggt 535
Query: 304 ttctactgcagttctgaataactattcatcttttctatacttagtaaaaaatataaaaga 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 ttctactgcagttctgaataactattcatcttttctatacttagtaaaaaatataaaaga 475
Query: 364 aaatgttgctggtaaaaagactggtagcatttcataaaatatttgttttacaatgtaata 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 aaatgttgctggtaaaaagactggtagcatttcataaaatatttgttttacaatgtaata 415
Query: 424 aaacatccacg 434
|||||||||||
Sbjct: 414 aaacatccacg 404
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 834
Length adjustment: 9
Effective length of query: 425
Effective length of database: 825
Effective search space: 350625
Effective search space used: 350625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
