CGCCAATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCCTTGATGTTTTCGAGTTAGGATCTTTTTGCATTTTGTATT
TTCTTTGATTGTTGTGCAGATGTTCTCTATGGAATCTTCTGCACCTGAGA
TTCTCTCTTCCATCTCTTGTATTCTGTTGCTGATGCTCACATCTATGGTG
TCAGATTTCTTTCCTAGGGCTTCTATCTCCAGTGTTGCCTCACTTTGGGT
TTTCTTTATTGTGTCTACTTCCCTTTTTAGGTCTTGGATGGTTTTATTCA
ATTCCATCACCTATTTGGTCGTGTTTTCCTGCAATTCTTTAAGGGATTTC
TGTGTTCCCTCTTTAAGGTCTTCTACCTGTTTAGCTGTTTTCTCCTGTAT
TTCTTTAAGCAAGTTATTAAAGTCCTTCTTGATGTCCTCTACCATCATCA
TGAGATATGTTTTCAAATCCGGGTCTAAATTTTTGAGTGTGTTGGGGTGC
CCAGGACTAGGTGGGGTGGGAGTGCTGCGTTCTGATGATGGTGAGTGGTC
TTGATTTTTGTTACTAGGATTCTTATGTTTGCCGTCTGCCATCTGGTAAT
CTCTGGAGCTAGTTGTTATAGTTGTCTCTGGTCAGAATTTGTTCCTCATG
TGATTATGTTAGCCTCTATCAGCAGACCTGGTTGACTATCTCTCTCCTTA
TTTTCTTAGATCACAGTACTCTCTGCAGGGTAGCTCTCCTCTTG

TTTCGCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTATGAAGTGGCTTGTGGGA
ATGAGTATGTTTTGATTTAAATAAACACAAACACAAACATAAACACACAC
ATACATAATCTAGTAGTTAATAGATAGCAATTAAGAGTAGTAATAAACAG
TAAATTAAATAGTTACTACTTGTCCTATGTTACAGTTATTTTCAACTCTG
TTTTATCACTTTATTTCTATTTGTGTTTCATAGAGTACAAAATATTTAAC
ATTTTGAACTGCTAACTCCTATTCTGTTTGTTGTATATAGAAAGTCCTTA
AACCATTTAAATTCTCTATTCATCAGCTATAGACAGCAGTACTAGTCATA
ACACCCTTATAGTACTATATCAATTGGTTCATGGAGACTTCATTGCTTAT
TGTTTCATTTAAAGTACCCAGAAGCACAATAAAATTTAAAAACAGAACTT
TCTTATTGAACAACAATCTACAAGGACATAAATGTTTTTACTTGTCCATC
TATGTAATCCTACAGTCTTTGAACTTTGGCAAGCATAAAGATAAACACTC
TTCTTGACAATGATCCACAATGGAAAATATTCAGAGAATTTGGTTGCTTG
CCAAATTGGAGTACACATTGAGTATCTCCTCCATGTTATTAGAGAAGATA
ACACTACTTGAAAAAGGACCCCAGTGTCATTTGAATTTAACTGTACTT

Query= MSMg01no506_c04.g1 MSMg01no506_c04.g1 CHROMAT_FILE:
MSMg01no506_c04.g1 PHD_FILE: MSMg01no506_c04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:34:13 2005
         (660 letters)



>mm_chrX_42655054_42656113
          Length = 1060

 Score = 1245 bits (644), Expect = 0.0
 Identities = 656/660 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tatgaagtggcttgtgggaatgagtatgttttgatttaaataaacacaaacacaaacata 60
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 860 tatgaagtggcttgtgggaatgagtatgttttgatttaaataaacacacacacaaacata 801

                                                                       
Query: 61  aacacacacatacataatctagtagttaatagatagcaattaagagtagtaataaacagt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 aacacacacatacataatctagtagttaatagatagcaattaagagtagtaataaacagt 741

                                                                       
Query: 121 aaattaaatagttactacttgtcctatgttacagttattttcaactctgttttatcactt 180
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 aacttaaatagttactacttgtcctatgttacagttattttcaactctgttttatcactt 681

                                                                       
Query: 181 tatttctatttgtgtttcatagagtacaaaatatttaacattttgaactgctaactccta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tatttctatttgtgtttcatagagtacaaaatatttaacattttgaactgctaactccta 621

                                                                       
Query: 241 ttctgtttgttgtatatagaaagtccttaaaccatttaaattctctattcatcagctata 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ttctgtttgttgtatatagaaagtccttaaaccatttaaattctctattcatcagctata 561

                                                                       
Query: 301 gacagcagtactagtcataacacccttatagtactatatcaattggttcatggagacttc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gacagcagtactagtcataacacccttatagtactatatcaattggttcatggagacttc 501

                                                                       
Query: 361 attgcttattgtttcatttaaagtacccagaagcacaataaaatttaaaaacagaacttt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 attgcttattgtttcatttaaagtacccagaagcacaataaaatttaaaaacagaacttt 441

                                                                       
Query: 421 cttattgaacaacaatctacaaggacataaatgtttttacttgtccatctatgtaatcct 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 440 cttattgaacaacaatctacaaggacataaatgtttttacttgtccatctaagtaatcct 381

                                                                       
Query: 481 acagtctttgaactttggcaagcataaagataaacactcttcttgacaatgatccacaat 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 acagtctttgaactttggcaagcataaagataaacactcttcttgacaatgatccacaat 321

                                                                       
Query: 541 ggaaaatattcagagaatttggttgcttgccaaattggagtacacattgagtatctcctc 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ggaaaatattcagagaatttggttgcttgccaaattggagtacacattgagtatctcctc 261

                                                                       
Query: 601 catgttattagagaagataacactacttgaaaaaggaccccagtgtcatttgaatttaac 660
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 260 catgttattagagaagataacactacttgaaaacggaccccagtgtcatttgaatttaac 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1060
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1050
Effective search space:   682500
Effective search space used:   682500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)