NAACTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCCAAGCTCTTTCGCTTCAAGAATTTTCTAGGACGTTGGAACAC
TGGTGGAGGCTTACATATGTCAGAATTCAATCTTAAAATCCACTTATAAT
AAAACAATACTGAAAGAAAGCATGCGGATCCATACACCAGACTAATGCGG
TGATAGGGTATGAGTAAAAGGGTTATGAGAATTCCAAGGTTCCAGGAGGT
TGAGTTTCCTTGAAACTCTTTGCCTCGTGAGTGCTTCCAGGCTTCTCTGC
CTGTCAAGCAGACTTCACTGGAGTGGATGTAGCATCTAAGGCCAGCCTAG
TCTACAAAATAAGTTCCTAGACAATCAGAGACATAATAGACATAATAGAG
AGCCTGTGATGGCTATTCTTGGGTCAAGATAAATATTTTTGACAATAACC
AAAACCAAAATTGATGGATACACCTGTGGTATTATTCTTGACTGAATCAT
TTGAAGTTAAAAGACCCATCCTAAATGCAGATCTTCTGAGATGGAAAGAT
CTACCTTAAACTTGGGCCACACCTTCTAGTAACACCTTTATAGAAGAAGG
ATGACTTTTCTCTGACTGCTTGACCTTACTCTTGCTGACAAATTCATTCC
TTCACAGACATTAGAGCCTACTTTTCAGTTCCAATGTATACTGAAGACCA
GCTGAAATATCCAGGCCCAGGGACTAAATAACTACTGGATTCTTTGTTGG
ACTACC

NTCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXACTAAGACAAGAATGATGTTTCTTG
CCAGTTCTGTTCAACATAATGGTGAAAATCTTCCTCAGAGCACTGAGGCA
AGAGAAACAAACCAAGCCCCATCAACTCAAAATAGCCAGACGTTAATCTG
AATGCAGGACTTTACTAGAACAATTTTAGAAACAGAAAATGATTTAATTA
AAGCTATAGAGTAGAACACCAGTATACATTTATCACTAGTATTTCTGTTA
TTTTCACACACACACACACACACACTCTCTCACACACACACACACACACA
CACACACAAACCTGCAAAAGAAACTGGGATTTTATTTATAAACAACAAAC
TGAAAATGAAGAATAATAGACTCAAGCAAAGAGACAAAATATCGAAATGC
TAAACAATATTAAAACACCATTTTGGGATAGCATCGGAAATGTAATTGAG
GAAAATACGTAATAAAAAAAATAAAAAAAAAACACCAATGGGACAAATCA
CATAGACAAGCAAATAGAAAGATACCCAATATTCATTGGTTGAAAACAGT
CATAGAATCAAGATAACCCTTATAATCCTTAAAAAAACCTTTCTTTAAGA
TTTATCGTGAGGTATGGTGTACTTTTGGGATAGCATTGGAAATGTAATTG
AGGAAAATATGTAATAAAAAATATTAAAAAAAAGATTTATCATGAGGTAG
CATGTGAGTACTGGGATTATG

Query= MSMg01no506_n13.g1 MSMg01no506_n13.g1 CHROMAT_FILE:
MSMg01no506_n13.g1 PHD_FILE: MSMg01no506_n13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:35:11 2005
         (614 letters)



>mm_chrX_22135740_22136753
          Length = 1014

 Score = 1131 bits (585), Expect = 0.0
 Identities = 609/619 (98%), Gaps = 5/619 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   actaagacaagaatgatgtttcttgccagttctgttcaacataatggtgaaaatcttcct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 880 actaagacaagaatgatgtttcttgccagttctgttcaacataatggtgaaaatcttcct 821

                                                                       
Query: 61  cagagcactgaggcaagagaaacaaaccaagccccatcaactcaaaatagccagacgtta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 820 cagagcactgaggcaagagaaacaaaccaagccccatcaactcaaaatagccagacgtta 761

                                                                       
Query: 121 atctgaatgcaggactttactagaacaattttagaaacagaaaatgatttaattaaagct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 atctgaatgcaggactttactagaacaattttagaaacagaaaatgatttaattaaagct 701

                                                                       
Query: 181 atagagtagaacaccagtatacatttatcactagtatttctgttatttt--cacacacac 238
           |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 700 atagagtagaacaccagtatacatttatcactagtatttctgttattttcacacacacac 641

                                                                       
Query: 239 acacacacacactctctcacacacacacacacacacacacacacaaacctgcaaaagaaa 298
           |||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 acacacacacacacacacacacacacacacacacacacacacacaaacctgcaaaagaaa 581

                                                                       
Query: 299 ctgggattttatttataaacaacaaactgaaaatgaagaataatagactcaagcaaagag 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 ctgggattttatttataaacaacaaactgaaaatgaagaataatagactcaagcaaagag 521

                                                                       
Query: 359 acaaaatatcgaaatgctaaacaatattaaaacaccattttgggatagcatcggaaatgt 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 520 acaaaatatcgaaatgctaaacaatattaaaacaccattttgggatagcattggaaatgt 461

                                                                       
Query: 419 aattgaggaaaatacgtaataaaaaaaataaaaaa---aaaacaccaatgggacaaatca 475
           |||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||
Sbjct: 460 aattgaggaaaatacgtaataaaaaaaataaaaaaaataaaacaccaatgggacaaatca 401

                                                                       
Query: 476 catagacaagcaaatagaaagatacccaatattcattggttgaaaacagtcatagaatca 535
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 catagacaagcaaatagaaagatacccaatattcattggttgaaaacagtcatagaatca 341

                                                                       
Query: 536 agataacccttataatccttaaaaaaacctttctttaagatttatcgtgaggtatggtgt 595
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 340 agataacccttataatccttaaaaaaacctttctttaagatttatcatgaggtatggtgt 281

                              
Query: 596 acttttgggatagcattgg 614
           |||||||||||||||||||
Sbjct: 280 acttttgggatagcattgg 262


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 66
Number of extensions: 17
Number of successful extensions: 16
Number of sequences better than 10.0: 1
Number of HSP's gapped: 12
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1014
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1004
Effective search space:   606416
Effective search space used:   606416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)