CCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTCTAAAGGTTACAAAAACATGATGCATTCCAGATCCAGTTTGTGAT
TATGTCCTATGGAATATTAATTTCTATATCCAACAGTATTACATCATCAG
TGTGGCTGAGTTCAGGTAGAATAGAATAATTTGCCACCTGGCTCCAATTA
CATACATTTGAATCAGAATATTGTTCAATTGCCTATATAGTGCAGGCTGG
CCTCATCAGAAACTCCTATGTTTTTCTTTACTCTCCCTAGTGGCTAGAAC
TACAATTACATTCCACTATTTCTATTTACAACTCTACGTAGACAATTTAA
TCCCTTTGCCTCAGCCTCCTGAGTGTTGGGATTATGGACATGAATCATGA
CACTCACCTAAGATATTTTTAATGATCACATATGCTGCCAAATTTCCTCT
GTTAAATTTGTCTTCCATACTATCAAACAGTATGATCTCCTTTAAACATA
AACAATCACTACTATAGTTGATGGTTAAAAGTTTTCAGTAACTTTGGATC
TCCTTCACGGTAAATTCGAAATTTCAGTGCTGCCTCACTTAAGTCCTCTC
AAGGAAGAACTGTCCATATCTCTATTATAGCATATATTATACTGCTTCAC
TATTTTCTTTTAAATATTCATCCTCTCATAGCCTGTTGATGAGAGAGACG
GCCTTCATCATGTTTGTCCTCTTATTACATCTAGGCACCCAAAATTTTA

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXGATCCCCAAAATCAGAATTCAAATCATGTATTGTCTTCA
TTATTTCATTAAGCCTTGTGTTACCTATATCAACATCATCCAGACACTTA
TTGCTATCCTCTTGAAATTCAATAAGGTTACTTATCCTCTTTATTAAACT
TCATTAATTCTTTAATACAATTTATGAGTGATCTGTTAAATTTTATCATG
TGATTCACCTAGGTAATTCTTGTTAAATACATTTATACTGGACTAGTGTG
TTTGATTAGAGAATGTTGTCTTGTTCTTTAATGATTGTTTTTGTGTATGC
CATGTGATGCAAGAATGTGCAGTTCTTCCTTTGATTGTGTGTCTGATGAG
ATATCTTTCTAGAACATTATCCATTTCATTTAGATTTTCCAATTTTGTGG
AGTACATGCTTTTGAAGTAAGACCCAATGATTCTTTTAATTTCTCGTTGT
CTGGTATTATATCTTCCTTTTCATTTCTGATTTTGTTGATTTGGATACTA
TCTCTCTGCAATTTTGTTAGTTTGGCTAAAGGTTTATCTATCTTGTGGAT
TTTCTCCAAGACACATTTCATTGGTTCTTTGTATTGCTTACTTTGGTTCT
AATTGATTGATTTTAGCCCTGATTTTGATTATTTCCTGCCATCTACCCCT
CTTCTGTATGTTTGCTTGGAAAATTTAAACAAAAAGGATGATTTTATTCT
ATA

Query= MSMg01no510_a21.b1 MSMg01no510_a21.b1 CHROMAT_FILE:
MSMg01no510_a21.b1 PHD_FILE: MSMg01no510_a21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:39:32 2005
         (673 letters)



>mm_chrX_109322424_109323499
          Length = 1076

 Score =  957 bits (495), Expect = 0.0
 Identities = 533/547 (97%), Gaps = 3/547 (0%)
 Strand = Plus / Minus

                                                                        
Query: 130  atttgaatcagaatattgttcaattgcctatatagtgcaggctggcctcatcagaaactc 189
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1076 atttgaatcagaatattgttcaattgcctatatagtgcaggctggcctcatcagaaactc 1017

                                                                        
Query: 190  ctatgtttttctttactctccctagtggctagaactacaattacattccactatttctat 249
            |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | 
Sbjct: 1016 ctatgtttttctttactctccctagtggctagaactacaactacattccactatttccag 957

                                                                        
Query: 250  ttacaactctacgtagacaatttaatccctttgcctcagcctcctgagtgttgggattat 309
             |||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 956  ctacaactctatgtagacaattcaatccctttgcctcagcctcctgaatgttgggattat 897

                                                                        
Query: 310  ggacatgaatcatgacactcacctaagatatttttaatgatcacatatgctgccaaattt 369
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 896  ggacatgaatcatgacactcacctaagatatttttaatgatcacatatgctgccaaattt 837

                                                                        
Query: 370  cctctgttaaatttgtcttccatactatcaaacagtatgatctcctttaaacataaacaa 429
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836  cctctgttaaatttgtcttccatactatcaaacagtatgatctcctttaaacataaacaa 777

                                                                        
Query: 430  tcactactatagttgatggttaaaagttttcagtaactttggatctccttcacggtaaat 489
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776  tcactactatagttgatggttaaaagttttcagtaactttggatctccttcacggtaaat 717

                                                                        
Query: 490  tcgaaatttcagtgctgcctcacttaagtcctctcaaggaagaactgtccatatctctat 549
            ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716  tcgaaatttcaatgctgcctcacttaagtcctctcaaggaagaactgtccatatctctat 657

                                                                        
Query: 550  tatagcatatattatactgcttcactattttcttttaaatattcatcctctcatagcctg 609
            | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656  tgtagcatatattatactgcttcactattttcttttaaatattcatcctctcatagcctg 597

                                                                        
Query: 610  ttgatgagagagacggccttcatcatgtttgtc---ctcttattacatctaggcacccaa 666
            ||||||| |||||| ||||||||||||||||||   ||||||||||||||||||||||||
Sbjct: 596  ttgatgaaagagacagccttcatcatgtttgtcgtcctcttattacatctaggcacccaa 537

                   
Query: 667  aatttta 673
            |||||||
Sbjct: 536  aatttta 530


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 673
Length of database: 1076
Length adjustment: 10
Effective length of query: 663
Effective length of database: 1066
Effective search space:   706758
Effective search space used:   706758
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)