XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTAAAA
GAATCATTAGGGAGGCGTTTGGCAACCTTCACAAGAACTTAGAGAAACTT
CAGTGAGATCAGAAAAGCAAGAAATGAACAAAACTGGACCTTTATCAAGT
CAATAACAAAAGAGAAAAGAATGAAGTGGAAGAAAGCATAGCATTTTTGC
TAGAATATCAGTTGACCATAGATGATTAAAGAAATTTGTAAAGGAGAGTA
AAGTAGAAATGAGGAAAAGATAGGAAAAAATAAACAAGATATAAAGTTTT
TAAAAATACACTAAGTGTGACAAGTACAGATTACTCAAATAACTATAGAG
CACAATAAATTAATATTTATATTTCTCTATAATTTGTTTCTTTCAGCTCT
TAACTTTCAATGTATTTATTAACATATTTAAGATGAATTTAAAAATTTGA
TAACTTTTAAATTATCACACAATTATACATGGGGGAATAAATACACAATA
CCCTTTGGATACCATGATAATTGTAAGCAATTATAATACTTTATTCTTAA
AATGCAGCAAAAAAGCTTATATGCGTGAAAACCAGGATATGGATTTTAGA
GAGATGAGAGGAGAACATAGGAAGAGTTGAGGGAAAGAGAGGGATGGATG
TGATCAAAGTGCACTGTACACATGTATGGAATTCTTTTTAAAAGACACCT
TTCACCAAGAAATGGCTTAGGCAATAGATTACTGTGCCATACTACTGTAT
CACATGGGATACTC

GGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGAGAAGCACCT
GAAAAAATGCTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAA
CCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCA
GGTGACAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAACACTCCTCCA
TTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGGAAATCAGTCTGGC
GGTTCCTCAGAAAACTGGATATAGTACTACCGGAGGATCCAGCAATACCT
CTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAAGGACACATG
CTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAG
AACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATC
TACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATT
CCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACAC
ATTCACAAAGGAACTCACACAATATGTACTCACTGATAAGTGGATATTAG
CCCAAAACCTAAGATACCCAAGATATAAGATACAATTTCCTAAACACATG
AAACTCAAGAAAAATGAAGACTGAAGTGTGAACACTATGCCCCTCCTTAG
AAGTGGGAACA

Query= MSMg01no513_b05.b1 MSMg01no513_b05.b1 CHROMAT_FILE:
MSMg01no513_b05.b1 PHD_FILE: MSMg01no513_b05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:43:27 2005
         (671 letters)



>mm_chrX_104945127_104946197
          Length = 1071

 Score = 1228 bits (635), Expect = 0.0
 Identities = 650/655 (99%)
 Strand = Plus / Minus

                                                                        
Query: 17   aatcattagggaggcgtttggcaaccttcacaagaacttagagaaacttcagtgagatca 76
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1071 aatcattagggaggcgtttggcaaccttcacaagaacttagagaaacttcagtgaaatca 1012

                                                                        
Query: 77   gaaaagcaagaaatgaacaaaactggacctttatcaagtcaataacaaaagagaaaagaa 136
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1011 gaaaagcaagaaatgaacaaaactggacctttatcaagtcaataacaaaagagaaaagaa 952

                                                                        
Query: 137  tgaagtggaagaaagcatagcatttttgctagaatatcagttgaccatagatgattaaag 196
            ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 951  tgaagtggaagaaagcataccatttttgctagaatatcagttgaccatagatgattaaag 892

                                                                        
Query: 197  aaatttgtaaaggagagtaaagtagaaatgaggaaaagataggaaaaaataaacaagata 256
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 891  aaatttgtaaaggagagtaaagtagaaatgaggaaaagataggaaaaaataaacaagata 832

                                                                        
Query: 257  taaagtttttaaaaatacactaagtgtgacaagtacagattactcaaataactatagagc 316
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 831  taaagtttttaaaaatacactaagtgtgacaagtacagattactcaaataactatagagc 772

                                                                        
Query: 317  acaataaattaatatttatatttctctataatttgtttctttcagctcttaactttcaat 376
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771  acaataaattaatatttatatttctctataatttgtttctttcagctcttaactttcaat 712

                                                                        
Query: 377  gtatttattaacatatttaagatgaatttaaaaatttgataacttttaaattatcacaca 436
            ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 711  gtatttattaacatatttaagatgaatataaaaatttaataacttttaaattatcacaca 652

                                                                        
Query: 437  attatacatgggggaataaatacacaataccctttggataccatgataattgtaagcaat 496
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651  attatacatgggggaataaatacacaataccctttggataccatgataattgtaagcaat 592

                                                                        
Query: 497  tataatactttattcttaaaatgcagcaaaaaagcttatatgcgtgaaaaccaggatatg 556
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 591  tataatactttattcttaaaatgcagcaaaaaagcttatatgcatgaaaaccaggatatg 532

                                                                        
Query: 557  gattttagagagatgagaggagaacataggaagagttgagggaaagagagggatggatgt 616
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531  gattttagagagatgagaggagaacataggaagagttgagggaaagagagggatggatgt 472

                                                                   
Query: 617  gatcaaagtgcactgtacacatgtatggaattctttttaaaagacacctttcacc 671
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471  gatcaaagtgcactgtacacatgtatggaattctttttaaaagacacctttcacc 417


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 671
Length of database: 1071
Length adjustment: 10
Effective length of query: 661
Effective length of database: 1061
Effective search space:   701321
Effective search space used:   701321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)