XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTT
GAGTACATCAGTTCTAAAGCTGAAATAATCTGCAGGTTATCTCAGTGATA
GTGGGGACTCTGAGGGACAGGCAGATGTGGAGGCAGAGGGGGAGCCAGAG
TGAGGACCTCGAATTCCAAGCCATACTAAGCTGTATAATTGAGCCTTTGT
CTCCATAACAACTAAAAGCTTCATGACTTCAGGGCATCTGATTATTCCCT
GTACCACTATTTACAAAGTCTTTGTTACAAATTCATAGTTTTTACAACCA
AAATTTTCAGGGAATGAGAGGATTAGGATTTCAAATTATTATTTCCTATT
ATTCTTTAACATTTTTTGCTTAAACTAGCAAAATATATGTATTCATTTTA
AAAATTTTCAATTTATTATTATTATTATTATTATTATTATTATTATTAAA
AATCAGTTTTACAGTCCAGTTCTTGTGTTCCTCTTGATTAAATTTGGTTA
CACTAGCCTCTAATTTTCTCTCATTAATCAAATAGCTTAAAACTTCTTTT
GTTTTTATGGAGTGAATATAATTTATGATAGTTAAAAGCCTGTTAAATAT
ACATGATATCTTCTAAAACTAAAATTCATATACATTCAACCAGTTTTTAA
AACCTATTTGGAATATTAACCCTGATAGAAGCTCCCAAAAATATCTCTTA
CATAGTCCTCTATGAAAGGAAGAAGTGACCAGTTCC

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXTCCCTTTCTCCCATTCTCCTGGATTCAGGCCT
TCAAATTCAAGTTGCAGGCAGGGAAACAAGAAATTTGACTGGCTCAGCCT
TCTTGCCGGCTCTGATTTTGCCATCTTTAATGCATACAGCAGACAATGGC
CTAATGTTCAAATTATTTGTATTTATTTATTAAAATTCATTTGTTTATTT
AATGTGTTTGTGTGCACATATTCTCATGCCACAGTACAATTGTGTGGATG
TCAGAGAACAACTTACAGAAATTGATTTTCTCCTACTATTTGCATACTAG
GGATCAAACTAAGGTCTTTAGGCTTGGCACTAAGCAGCTATACAAGGTGA
GCCATCTTGATATCCCAAATTCTACCACCCTGGATGGCTTTAATTGCTCT
TTTGTCAGTCAGATCTCACTGTGTTCCTCAGGTTTATCTTAGATATCTGT
CCTTCTTGAGTTTCAAGAGTACATAGAAATCATTTGAAACTATGCAAAAT
GTTTTTGCTCCATTTTGGCATTAACAGTTCATTTAACTGTTGTTTTGGAG
AAGTATCCTAATTTCATCACTTTAACAACATTGTACTCATGTCTGCTATA
TTTCACTTCATTACAGATTATTCTTGTATTATTTACATTTTTTTGAAAAT
TGGAATCCATGATGAGCATTATTTTAGTAAAGATGAATTCTTA

Query= MSMg01no513_g07.b1 MSMg01no513_g07.b1 CHROMAT_FILE:
MSMg01no513_g07.b1 PHD_FILE: MSMg01no513_g07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:43:52 2005
         (698 letters)



>mm_chrX_53259481_53260578
          Length = 1098

 Score = 1218 bits (630), Expect = 0.0
 Identities = 656/670 (97%), Gaps = 9/670 (1%)
 Strand = Plus / Minus

                                                                        
Query: 38   taatctgcaggttatctcagtgatagtggggactctgagggacaggcagatgtggaggca 97
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1095 taatctgcaggttatctcagtgatagtggggactctgagggacaggcagatgtggaggca 1036

                                                                        
Query: 98   gagggggagccagagtgaggacctcgaattccaagccatactaagctgtataattgagcc 157
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1035 gagggggagccagagtgaggacctcgaattccaagccatactaagctgtataattgagcc 976

                                                                        
Query: 158  tttgtctccataacaactaaaagcttcatgacttcagggcatctgattattccctgtacc 217
            |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 975  tttgtctccataacaactaaaagcttcatgacttcagggcatctgactattccctgtacc 916

                                                                        
Query: 218  actatttacaaagtctttgttacaaattcatagtttttacaaccaaaattttcagggaat 277
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 915  actatttacaaagtctttgttacaaattcatagtttttacaaccaaaattttcagggaat 856

                                                                        
Query: 278  gagaggattaggatttcaaattattatttcctattattctttaacattttttgcttaaac 337
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 855  gagaggattaggatttcaaattattatttcctattattctttaacattttttgcttaaac 796

                                                                        
Query: 338  tagcaaaatatatgtattcattttaaaaattttcaat---------ttattattattatt 388
            |||||||||||||||||||||||| ||| ||||||||         ||||||||||||||
Sbjct: 795  tagcaaaatatatgtattcatttttaaatttttcaatttattattattattattattatt 736

                                                                        
Query: 389  attattattattattattattaaaaatcagttttacagtccagttcttgtgttcctcttg 448
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735  attattattattattattattaaaaatcagttttacagtccagttcttgtgttcctcttg 676

                                                                        
Query: 449  attaaatttggttacactagcctctaattttctctcattaatcaaatagcttaaaacttc 508
             |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 675  gttaaatttggttacactagcctctaattttctctcattaatcaaatagcttataacttc 616

                                                                        
Query: 509  ttttgtttttatggagtgaatataatttatgatagttaaaagcctgttaaatatacatga 568
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615  ttttgtttttatggagtgaatataatttatgatagttaaaagcctgttaaatatacatga 556

                                                                        
Query: 569  tatcttctaaaactaaaattcatatacattcaaccagtttttaaaacctatttggaatat 628
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555  tatcttctaaaactaaaattcatatacattcaaccagtttttaaaacctatttggaatat 496

                                                                        
Query: 629  taaccctgatagaagctcccaaaaatatctcttacatagtcctctatgaaaggaagaagt 688
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495  taaccctgatagaagctcccaaaaatatctcttacatagtcctctatgaaaggaagaagt 436

                      
Query: 689  gaccagttcc 698
            ||||||||||
Sbjct: 435  gaccagttcc 426


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 51
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 698
Length of database: 1098
Length adjustment: 10
Effective length of query: 688
Effective length of database: 1088
Effective search space:   748544
Effective search space used:   748544
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)