XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTC
GCCTGAGGAATACCGAATGGCAGAGAAGCACCTGAAAAAATGTTCAACAT
CCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGATTCCACCTC
ACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCAGATGCTG
GCGTGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTGCA
GGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGAAAATTG
GACATAGTACTACCGGAGGATCCAGCAATACCTCTCCTGGGCATATATCC
AGAAGATGCCCCAACTGGTAAGAAGGACACATGCTCCACTATGTTCATAG
CAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATGCCCCTCA
ACAGAGGAATGGATACAGAAAATGTGGTACATCTACACAATGGAGTACTA
CTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGGCAAATGGATGG
ACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCACAAAGGAACTCA
CACAATATGTACTCCCTGATAAGTGGATATTAGCACAAAACCTAGGATAC
CCAAGATATAAGATACAATTTCCTAAACACATGANACTCAAGAAAAATGA
AGACTGAAGTGTGGACACTATGCCCCTCCTTAGAAGTGGGAACAAAACAC
CCTTGG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXCTTTAAACAGAAATTTGAATAAATCTTAAAAT
AAATGTGTATATTCTTGTTGCTCTAAATCTATTCATAACCTCTCTTTTCT
CTACTCCTTGGTCAATAAGAAAAATATAGCCATTATACTTGATGATTAAG
TCATTTCTGGTTATTCACTAAGAATTGACACAACCACAATATTCTTGCCA
TCCTAGCTTAAATAGGTCATAATCAGTATCACTAGTACTTGACTAGACTA
AATGACTTCTGCTACATTGGTTATACTCTTACTGTACAAGTTTCTGAATC
ACACATGCAAACATGTTTCTATATTTTTGTCACTACATATGCCAACAGAA
ATTATAATATGTATTAGAATGACTTTTTGTGTGTTATCTCCTTTAGAATT
CTCTCTGGCTCCTGAATGTTAGGTTCATGCCAATTATATGTTTGAAATTT
CTTATGGAATCATCAAATACTATTTCAAGTTGTTTTAGTTGGAATGTGAA
ATGTCACTCATAGGCACGGGTGTTTGAACATTTGGTCTTTTATTGGGAGC
AATATTGGACAGGTTGCACAACCTTGGCAAAGGAAGTATAAATCATTGGG
CTTAGCCTTTGACAGTTCATATCTTGCTCTACATCCAGTGTAATTTCCCT
TCTAAGTCCCTGTGGTATAAGATGTGAAGTCTCCAGCTCTGGCTCTTTGC
TGTCA

Query= MSMg01no513_h05.g1 MSMg01no513_h05.g1 CHROMAT_FILE:
MSMg01no513_h05.g1 PHD_FILE: MSMg01no513_h05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:43:57 2005
         (646 letters)



>mm_chrX_16089936_16090985
          Length = 1050

 Score =  874 bits (452), Expect = 0.0
 Identities = 601/652 (92%), Gaps = 8/652 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctttaaacagaaatttgaataaat-cttaaaataaatgtgtatattcttgttgctctaaa 59
           |||||||||||||||||||||||| || |||| |||||| | ||||||||||||||||||
Sbjct: 201 ctttaaacagaaatttgaataaatactaaaaacaaatgtatgtattcttgttgctctaaa 260

                                                                       
Query: 60  tctattcataacctctcttttct---ctactccttggtcaataag-aaaaatatagccat 115
           ||||||||||||||||| |||||   |||||| |||||||||||| ||||||| ||||||
Sbjct: 261 tctattcataacctctc-tttctttcctactctttggtcaataagaaaaaatacagccat 319

                                                                       
Query: 116 tatacttgatgattaagtcatttctggttattcactaagaattgacacaaccacaatatt 175
           |||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||
Sbjct: 320 tatacttgatgattaagtcatttctggcgattcactaagaatttacacaaccacaatatt 379

                                                                       
Query: 176 cttgccatcctagcttaaataggtcataatca-gtatcactagtacttgactagactaaa 234
            |||||||||||||||||||||| |||  | | |||||||||||||||| ||||||||||
Sbjct: 380 tttgccatcctagcttaaataggccatggt-aggtatcactagtacttgcctagactaaa 438

                                                                       
Query: 235 tgacttctgctacattggttatactcttactgtacaagtttctgaatcacacatgcaaac 294
           ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 439 tgacttctgctacattggttatactcttactgtgcaagtttctgaatcatacatgcaaac 498

                                                                       
Query: 295 atgtttctatatttttgtcactacatatgccaacagaaattataatatgtattagaatga 354
           ||| || ||||| |||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 499 atgcttatatatctttgtcactatatatgccaacataaattataatatgtattagaatga 558

                                                                       
Query: 355 ctttttgtgtgttatctcctttagaattctctctggctcctgaatgttaggttcatgcca 414
           ||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||
Sbjct: 559 ctttttgtgtgttatctcctttagaattctctctggctcttaaatattaggttcatgcca 618

                                                                       
Query: 415 attatatgtttgaaatttcttatggaatcatcaaatactatttcaagttgttttagttgg 474
            ||||||||||||||| |||||||||||||||| ||| ||| |||||||||| | |||||
Sbjct: 619 cttatatgtttgaaatatcttatggaatcatcagatagtatgtcaagttgttatggttgg 678

                                                                       
Query: 475 aatgtgaaatgtcactcataggcacgggtgtttgaacatttggtcttttattgggagcaa 534
           |||| |||||||||||||||||||| |||||||||| ||||| |||||||||||||||| 
Sbjct: 679 aatgagaaatgtcactcataggcacaggtgtttgaatatttgatcttttattgggagcac 738

                                                                       
Query: 535 tattggacaggttgcacaaccttggcaaaggaagtataaatcattgggcttagcctttga 594
           |||||| ||||||| ||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct: 739 tattgggcaggttgtacaaccttggcaaaggaagtatatatcattgggcatagcctttga 798

                                                               
Query: 595 cagttcatatcttgctctacatccagtgtaatttcccttctaagtccctgtg 646
            ||||||||||||||||||||||||||||||||||  |||||||||||||||
Sbjct: 799 aagttcatatcttgctctacatccagtgtaatttcatttctaagtccctgtg 850


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1050
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1040
Effective search space:   661440
Effective search space used:   661440
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)