Query= MSMg01no515_m09.b1 MSMg01no515_m09.b1 CHROMAT_FILE:
MSMg01no515_m09.b1 PHD_FILE: MSMg01no515_m09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:47:13 2005
(717 letters)
>mm_chrX_21635621_21636738
Length = 1118
Score = 1303 bits (674), Expect = 0.0
Identities = 704/714 (98%), Gaps = 1/714 (0%)
Strand = Plus / Minus
Query: 5 gaattctactactatttcaagacaccataaccaaggcaagtcttataaggacaacattta 64
||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1080 gaattctactactataaaaagacgccataaccaaggcaagtcttataaggacaacattta 1021
Query: 65 attggggctggcttagaggttcagaggttcagtccatttttatcaaggcaggaacatggc 124
||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1020 attggggctggcttacaggttcagaggttcagtccatttttatcaaggcaggaatgtggc 961
Query: 125 agcatcatgacaggcatggtgcaggaggaatggagagttctacattttcatctgaaggct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 960 agcatcatgacaggcatggtgcaggaggaatggagagttctacattttcatctgaaggct 901
Query: 185 actagcagaatactgacttccaggccgctaggattagaagggcttatgtgcatgcccaca 244
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 900 actagcagaatactgacttccaggccgctaggattagaggggcttatgtgcatgcccaca 841
Query: 245 gtgatatacctaccccaacaaggccccacttcctaatagtgacactctctgggccaagaa 304
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 gtgatacacctaccccaacaaggccccacttcctaatagtgacactctctgggccaagaa 781
Query: 305 tgtacaaaccattacagttacatatctaaattttatcctgggcatatattcacttcatga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 tgtacaaaccattacagttacatatctaaattttatcctgggcatatattcacttcatga 721
Query: 365 atgtttattagaaagtgaattgatggtctctttcatttcacacaaaattatatttctctt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 atgtttattagaaagtgaattgatggtctctttcatttcacacaaaattatatttctctt 661
Query: 425 cttccatttccttactggatatatggttgataggt-aattgtatttgcattttattactt 483
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 660 cttccatttccttactggatatatggttgataggtaaattgtatttgcattttattactt 601
Query: 484 gttcatgcttttaaaaacaccctagaagttatttatagttgtttttgccttttcttgatt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 gttcatgcttttaaaaacaccctagaagttatttatagttgtttttgccttttcttgatt 541
Query: 544 tttttttattttatagatgtttttgttttggttttagatatagcattttattcaagttga 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 tttttttattttatagatgtttttgttttggttttagatatagcattttattcaagttga 481
Query: 604 cattgaattcctaattcaactgccttagcctcctttgtttggggattacaaatatatgcc 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 cattgaattcctaattcaactgccttagcctcctttgtttggggattacaaatatatgcc 421
Query: 664 accattcatggctcctaccttattgagagtcttataatacatataattcattgg 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 accattcatggctcctaccttattgagagtcttataatacatataattcattgg 367
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 717
Length of database: 1118
Length adjustment: 10
Effective length of query: 707
Effective length of database: 1108
Effective search space: 783356
Effective search space used: 783356
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no515_m09.g1 MSMg01no515_m09.g1 CHROMAT_FILE:
MSMg01no515_m09.g1 PHD_FILE: MSMg01no515_m09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:47:13 2005
(698 letters)
>mm_chrX_21557638_21558735
Length = 1098
Score = 1334 bits (690), Expect = 0.0
Identities = 696/698 (99%)
Strand = Plus / Plus
Query: 1 ctatgaactcaatatttcaatgagattttcaaaaagaaaaagataatttgacttgggata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctatgaactcaatatttcaatgagattttcaaaaagaaaaagataatttgacttgggata 260
Query: 61 agatcttaaatcatcaattttcaaaacaaactgtgatatagagtaaaatttttgaaggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agatcttaaatcatcaattttcaaaacaaactgtgatatagagtaaaatttttgaaggaa 320
Query: 121 cttcttaatttaattgcacttaaattattgctagatgctgataagccataggaaatatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttcttaatttaattgcacttaaattattgctagatgctgataagccataggaaatatat 380
Query: 181 ataagatataaataagtgatttagtaataaaccaaagtttatcatttctttgaattagtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ataagatataaataagtgatttagtaataaaccaaagtttatcatttctttgaattagtt 440
Query: 241 ttcttttttaacaataatattaattgactgattgattatatcactaatataatcatatta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttcttttttaacaataatattaattgactgattgattatatcactaatataatcatatta 500
Query: 301 aaatacttaaatgccatcaaatataaaataattttctgattatataatagctgagtcttt 360
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaatacttatatgccatcaaatataaaataattttctgattatataatagctgagtcttt 560
Query: 361 catgtaaagtgacattttattgtagttttagaattttgaactagaatgtataataaatct 420
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 catgtaaagtgacatgttattgtagttttagaattttgaactagaatgtataataaatct 620
Query: 421 agtaatgaattagaaattaatttcaaaatctgtttgactttctatatacaatttactttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agtaatgaattagaaattaatttcaaaatctgtttgactttctatatacaatttactttt 680
Query: 481 aactaagaaaatatattttgatttttaaaaaattattggtatcttaaatcaagggatata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aactaagaaaatatattttgatttttaaaaaattattggtatcttaaatcaagggatata 740
Query: 541 agtaaaatagacaaatataattggtttacaattactcaatatcttgtcttcttattgtat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 agtaaaatagacaaatataattggtttacaattactcaatatcttgtcttcttattgtat 800
Query: 601 actctgtagttctatggttttgatgctactaagtctagacatgagctttactgggccacg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 actctgtagttctatggttttgatgctactaagtctagacatgagctttactgggccacg 860
Query: 661 tgcttttgctacccccatgtggcttctaattaacctgc 698
||||||||||||||||||||||||||||||||||||||
Sbjct: 861 tgcttttgctacccccatgtggcttctaattaacctgc 898
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 698
Length of database: 1098
Length adjustment: 10
Effective length of query: 688
Effective length of database: 1088
Effective search space: 748544
Effective search space used: 748544
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
