NNNCCCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCCTGATTTTTCCAGACTTTTATCATGAATGGGTGATGGATTT
TGTTAAATGCTTTCTCTGCATTTAACGAGATGATCATGTGTTTTTTGTCT
TTGAGTTTGTTTATATAATGAATTACGTTGATGGAATTTCATATATTAAA
CCATCCCTGCATCCCTGGAAAGAAACATACTTGGCCAAATTGGATGGTTG
TTTTGATGTGTTGTTGGATTTGGTTAGCAAGAATATTATTGAGTATTTTT
GCATTGATATTCATAAGGAAAATTGGTCTGAAGTTCTCTATCTTTGTTGG
GTCTTTCGGTGGTTTAGATATCAGAGTAATTGTGGCTTCGTAGAATGAAT
TGGGAAGAGTACCTTTTGCTTATATACTGTGGAACAGTTTGTGAAGAACT
GGAATTAGATCTTCTTTGAAGGTCTGATAGAACTCTGCAATAAACCCTTC
TGATCCTGGGCTTTTTTTGGCAGGGAGACTATTAATGACTGCTTCTATTT
CTTTAGGGGATACAGTACTGTTTAGACCTGATTTAACCTGATCCTGATTT
AACTTTGGTACCTGGTATCTGTCTAGGAATTTGTCCATTTTATCCAGGTT
TTCCAGTTCTGTTGAGTATAGCTTTTGTAGAAGGATCTGATGGCATTTTG
GATTTCTTCAGGATCTGTTGTCATGTCTCCCCGTTCATTTCTGATTTTGN
NTAATAGGATGCTTTCCCTG

NNNCCAATGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTTTAACTTAAGATCAGTGGC
TCCATGTGTTGAATCCCATATTCTGAACCACATGAACATTAATTGATGTT
GCAATGATAACTCGTGAAACTTAAGAAAAAATTGAATTGTGACTAATATT
CTTAGTTAAGTTCCCAGGGAAGGCATTGTTTTAGATTTCTTATTGGTTCG
GGAGTACATTGTCTTTGGAGAGTAAACTGTTTAAAATGGCAACATATATA
CAATGTCACAGAATAGAACAGTAATTGCTAGAAGCCGCTCCAATAATCAA
GTCAAATAATAAAGTCAATCATGTGGTGGCTTGGTCAGTTTTATTTCATT
ACATAGCTAATCGATAATGATCCTCATCTGTATCCATGTTTTTCACTAGT
TGAATGTTCTCAAAATTTAATCTCCAAATTTATATGTTGATAGTGTTTAG
AGATGAAGGGTATGGGATGCCACTGGAAGTAGAATGTCTTTAGTGTTAGG
GCTTTATGAGCAGAGAAGTAGTTTTATAAGTGAGAATGAAAACCTAGAGC
TGAAAAATACTCATTCACACATAAAAGCCTCCCATACCATGAGCTAAATA
AGGTTTTGTATAAACTGCCCTGTCTAGAATGTTTTATTACNATAGAAACA
GACTGAGACNATGTGATATATTCCTTCATAATATCAACTGTCATCATACA
ATAATGAAATGATTTGTAGACC

Query= MSMg01no518_b10.g1 MSMg01no518_b10.g1 CHROMAT_FILE:
MSMg01no518_b10.g1 PHD_FILE: MSMg01no518_b10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:50:24 2005
         (594 letters)



>mm_chrX_63433348_63434341
          Length = 994

 Score = 1141 bits (590), Expect = 0.0
 Identities = 593/594 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctttaacttaagatcagtggctccatgtgttgaatcccatattctgaaccacatgaacat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctttaacttaagatcagtggctccatgtgttgaatcccatattctgaaccacatgaacat 260

                                                                       
Query: 61  taattgatgttgcaatgataactcgtgaaacttaagaaaaaattgaattgtgactaatat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taattgatgttgcaatgataactcgtgaaacttaagaaaaaattgaattgtgactaatat 320

                                                                       
Query: 121 tcttagttaagttcccagggaaggcattgttttagatttcttattggttcgggagtacat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcttagttaagttcccagggaaggcattgttttagatttcttattggttcgggagtacat 380

                                                                       
Query: 181 tgtctttggagagtaaactgtttaaaatggcaacatatatacaatgtcacagaatagaac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtctttggagagtaaactgtttaaaatggcaacatatatacaatgtcacagaatagaac 440

                                                                       
Query: 241 agtaattgctagaagccgctccaataatcaagtcaaataataaagtcaatcatgtggtgg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtaattgctagaagccgctccaataatcaagtcaaataataaagtcaatcatgtggtgg 500

                                                                       
Query: 301 cttggtcagttttatttcattacatagctaatcgataatgatcctcatctgtatccatgt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cttggtcagttttatttcattacatagctaatcgataatgatcctcatctgtatccatgt 560

                                                                       
Query: 361 ttttcactagttgaatgttctcaaaatttaatctccaaatttatatgttgatagtgttta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttttcactagttgaatgttctcaaaatttaatctccaaatttatatgttgatagtgttta 620

                                                                       
Query: 421 gagatgaagggtatgggatgccactggaagtagaatgtctttagtgttagggctttatga 480
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 621 gagatgaagggtatgggatgccactggaagtagaatgtctttagtgtgagggctttatga 680

                                                                       
Query: 481 gcagagaagtagttttataagtgagaatgaaaacctagagctgaaaaatactcattcaca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gcagagaagtagttttataagtgagaatgaaaacctagagctgaaaaatactcattcaca 740

                                                                 
Query: 541 cataaaagcctcccataccatgagctaaataaggttttgtataaactgccctgt 594
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cataaaagcctcccataccatgagctaaataaggttttgtataaactgccctgt 794


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 594
Length of database: 994
Length adjustment: 10
Effective length of query: 584
Effective length of database: 984
Effective search space:   574656
Effective search space used:   574656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)