NNNNNNCCCCTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCTCATCTGATGAATACCAAATGGCTGAGAAGCACATGA
AAAAATGTTCAGCATCCTTAATCATCAGACAAATGCAAATCAAAACAACA
CTGAGATTACACCTCACACCAGTCAGAATGGCTAAGATGAAAAATTCAGG
TGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATT
GTTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGCAG
TTTCTCAGAAAATTGGACATAATACTACCGGAGGATCCCACAATAGAAAA
TTGGACATAATACTACCGGAGGATCCCACAATACCTCTCCTGGGCATATA
TCCAGAAGATGTTCCAACTGGTAAGAAGGACACATGCTCCACTATGTTCA
TAGCAACCTTATTTATAATAGCCAGAAGCTGGAGAAAATCCAGGTGTCCC
TCAACTGATGAATGGATACAATGTAGCAATATTAATAACATAATATGTCC
CACCTGAATTTTGAAAGAATGAAATGGAAAAATACAAATATAATGCTGAG
CAGTTCATCTACTATAGAAAAAATTAACAGACAAATGTTCACTGGTATTT
CTTATCCACTTCAGGAGTTCTTCTGTCTTCCTTATTTTGGCCTGCTGCTG
CTTGCCTATGATCTTTCCTTCTGGATTCCTATATTCAGGTCACTGCACAN

NNNNNNCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGA
ATGGCAGAGAAGCACCTGAAAAAATGCTCAACATCCTTAATCATCAGGGA
AATGCAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGG
CTAAGATCAAAAATTCAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAA
AGAGGAACACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACT
CTGGAAATCAGTCTGGCGGTTCCTCAGAAAACTGGATATAGTACTACCGG
AGGATCCAGCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACT
GGTAAGAAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAAT
AGCCAGAAGCTGGAAGGAACCCAGATGCCCCTCAACAGAGGAATGGATAC
AGAAAATGTGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAG
AATGAATTTATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCAT
CCTGAGTGAGGTAACACAATCACAAAGGAACTCACACAATATGTACTCAC
TGATAAGTGGATATTAGCCCAAAACCTAAGATACCCAAGATATAAGATAC
AATTTCCTAAACACATGAAACTCAAGAAAAATGAAGACTGAAGTGTGAAC
CCTATGCCCCTCCC

Query= MSMg01no521_l23.b1 MSMg01no521_l23.b1 CHROMAT_FILE:
MSMg01no521_l23.b1 PHD_FILE: MSMg01no521_l23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:10 2005
         (661 letters)



>mm_chrX_162343063_162344123
          Length = 1061

 Score = 1237 bits (640), Expect = 0.0
 Identities = 652/656 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctcatctgatgaataccaaatggctgagaagcacatgaaaaaatgttcagcatcc 64
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcatctgaggaataccaaatggctgagaagcacatgaaaaaatgttcagcatcc 264

                                                                       
Query: 65  ttaatcatcagacaaatgcaaatcaaaacaacactgagattacacctcacaccagtcaga 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttaatcatcagacaaatgcaaatcaaaacaacactgagattacacctcacaccagtcaga 324

                                                                       
Query: 125 atggctaagatgaaaaattcaggtgacagcagatgctggcgaggatgtggagaaagagga 184
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atggctaagatcaaaaattcaggtgacagcagatgctggcgaggatgtggagaaagagga 384

                                                                       
Query: 185 acactcctccattgttggtgggattgcaagcttgtacaaccactctggaaatcagtctgg 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 acactcctccattgttggtgggattgcaagcttgtacaaccactctggaaatcagtctgg 444

                                                                       
Query: 245 cagtttctcagaaaattggacataatactaccggaggatcccacaatagaaaattggaca 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cagtttctcagaaaattggacataatactaccggaggatcccacaatagaaaattggaca 504

                                                                       
Query: 305 taatactaccggaggatcccacaatacctctcctgggcatatatccagaagatgttccaa 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 taatactaccggaggatcccacaatacctctcctgggcatatatccagaagatgttccaa 564

                                                                       
Query: 365 ctggtaagaaggacacatgctccactatgttcatagcaaccttatttataatagccagaa 424
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ctgttaagaaggacacatgctccactatgttcatagcaaccttatttataatagccagaa 624

                                                                       
Query: 425 gctggagaaaatccaggtgtccctcaactgatgaatggatacaatgtagcaatattaata 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gctggagaaaatccaggtgtccctcaactgatgaatggatacaatgtagcaatattaata 684

                                                                       
Query: 485 acataatatgtcccacctgaattttgaaagaatgaaatggaaaaatacaaatataatgct 544
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 acataatatgtcccaactgaattttgaaagaatgaaatggaaaaatacaaatataatgct 744

                                                                       
Query: 545 gagcagttcatctactatagaaaaaattaacagacaaatgttcactggtatttcttatcc 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gagcagttcatctactatagaaaaaattaacagacaaatgttcactggtatttcttatcc 804

                                                                   
Query: 605 acttcaggagttcttctgtcttccttattttggcctgctgctgcttgcctatgatc 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 acttcaggagttcttctgtcttccttattttggcctgctgctgcttgcctatgatc 860


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1061
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1051
Effective search space:   684201
Effective search space used:   684201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)