Query= MSMg01no522_a16.b1 MSMg01no522_a16.b1 CHROMAT_FILE:
MSMg01no522_a16.b1 PHD_FILE: MSMg01no522_a16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:33 2005
(616 letters)
>mm_chrX_35972586_35973601
Length = 1016
Score = 588 bits (304), Expect = e-172
Identities = 307/308 (99%)
Strand = Plus / Minus
Query: 5 gaattccaagaatacttaagtgaacttgaagggagtaaataatttattatgccctatcat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gaattccaagaatacttaagtgaacttgaagggagtaaataatttattatgccctatcat 249
Query: 65 ttattgttccccatgcatcctgactggaattaaactatttgaaaagcttggcatggtggt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ttattgttccccatgcatcctgactggaattaaactatttgaaaagcttggcatggtggt 189
Query: 125 aatccaggaactcaaggagctaaggcaggaggatcaggagtgcagggcagcttgaactat 184
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 aagccaggaactcaaggagctaaggcaggaggatcaggagtgcagggcagcttgaactat 129
Query: 185 acacatagcaagacctttccttaagggggaaaagaagaatcttgaaaatgtttggatgga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 acacatagcaagacctttccttaagggggaaaagaagaatcttgaaaatgtttggatgga 69
Query: 245 tttttctgttttgcctaaagaaaaaccaatataatgcatgttgatattaaaatatctgta 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 tttttctgttttgcctaaagaaaaaccaatataatgcatgttgatattaaaatatctgta 9
Query: 305 atgggtta 312
||||||||
Sbjct: 8 atgggtta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1016
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1006
Effective search space: 609636
Effective search space used: 609636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no522_a16.g1 MSMg01no522_a16.g1 CHROMAT_FILE:
MSMg01no522_a16.g1 PHD_FILE: MSMg01no522_a16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:33 2005
(538 letters)
>mm_chrX_35790685_35791622
Length = 938
Score = 992 bits (513), Expect = 0.0
Identities = 536/553 (96%), Gaps = 15/553 (2%)
Strand = Plus / Plus
Query: 1 caggctaggtagggctatacaatgagactctaaaaataaaaaatatattctgggtaataa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 caggctaggtagggctatacaatgagactctaaaaataaaaaatatattctgggtaataa 245
Query: 61 gtctctgagagtctgctatattattctctctgggtttttaatatgtattttaatcataaa 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 gtctctgtgagtctgctatattattctctctgggtttttaatatgtattttaatcataaa 305
Query: 121 aacattttttaagtagcagcttcaaagttacttcaattattaaatgcctaaaacttagca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 aacattttttaagtagcagcttcaaagttacttcaattattaaatgcctaaaacttagca 365
Query: 181 tttcagagcagggcagtggtggtgcacgcctttaatcccagcactccgaaggcagaagca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 tttcagagcagggcagtggtggtgcacgcctttaatcccagcactccgaaggcagaagca 425
Query: 241 ggaggatctctgtgggttgaaggccagtatcatctagactgagtgccacgatagcaaagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 ggaggatctctgtgggttgaaggccagtatcatctagactgagtgccacgatagcaaagg 485
Query: 301 ctgtacaaagaaaccctgtctcagaaaaaccaacaaagcaaagcaaagcaaagcaaagca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 ctgtacaaagaaaccctgtctcagaaaaaccaacaaagcaaagcaaagcaaagcaaagca 545
Query: 361 aagcaaa---------------acaaaagtagcatttcaaactactaaattatttcaaag 405
||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 546 aagcaaagcaaagcaaagcaaaacaaaagtagcatttcaaactactaaattatttcaaag 605
Query: 406 gcaattctctaaagtgtacataaagaaagtattttaaattcaaaaggtttgatactttat 465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 gcaattctctaaagtgtacataaagaaagtattttaaattcaaaaggtttgatactttat 665
Query: 466 tattcagaagacagtcacagaaaaagtcaactacttgtttataataaagacaaggaaagg 525
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 666 tattcagaagacagtcacagaaaaagtcaaccacttgtttataataaagacaaggaaagg 725
Query: 526 ggttagcatgtta 538
|||||||||||||
Sbjct: 726 ggttagcatgtta 738
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 6
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 538
Length of database: 938
Length adjustment: 10
Effective length of query: 528
Effective length of database: 928
Effective search space: 489984
Effective search space used: 489984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
