NNNNNTTTTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXCGCGGAATTCTCACCCGATGAATACGGAATGGCTGAGAAGTGCCTG
ATAAAATGTTCAGTATCCTTAATCATCAGGGAAATGCAAATCAAAACAAA
CCTGAGATTCCACCTCACACCAGTCTGAATGGCTAAGATCAAAAATTCAG
GTGACAGCAGACGCTGGCGAGGATGTGGAGAAGGAGGAACACTCCTCCAT
TGTTGGTGGGATTGCAAGCTTGTACGACCACTGTGGAAATCATTCTGGTG
GTTCCTCAGGAAATTGGACATAGTACTACCAGAGGATGCCGCAATACTGT
GGGCATGTAAATGTGTGTTTCTCTAGTGTACAGTGATGGCAGTGTGAATG
TGAGTGTGTGTTTCTCTAGAGTGTAGGAAGTCTTTTGGTATGTGAAAATG
TTTTTTTGTAGAGTGATGACAGCAATGGGCATTTCTATGTGTTTTTCTGT
ACAGTGCAGTCTGCAGATTCTTATGCATAATTGGTTCTGTAGAGTGCATT
GACGGCAGTGGACATGTGAATGTGTGTTTCTATTGGGGGCATGATAGCAG
TGGGCATTGACATGTGTGTTTCAGTATTGTGTAGTATAGTAGTGGGCCTG
TGATCGTGTGTTTCTGTAAAGTGCTGGATATCTGTAGTCATGCTAATGTT
TGCTTCTGTAGAGTTCANTGATGGCAGTAAATGTATGAACATGTGNTTCC
CCTTGAGTCAAA

NNNNNCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAGTAGTATGGGTAATGTT
AAATTTTTGACAGAAAGTTTCAAATGCTCGACTGCAATAGCCAGTTCCAT
TATCTGTTTTAATCTGACAGGGAACATCCAGTATAGAAAAATAATGTAGA
CAATGATTAATTATGGTTTTAGTTGCTGCTCATGTTAAAGCAGTTGCAAC
TAGAAAGCCCAAAAAGGTGTTAATATTCACATGTACATATTTTAAATTTC
CAAAATCAGAAATATGAGTAACATCCATTTGCCATAATTGATTAGGTATA
AATCCTCAAGTATTAACACCATTATGTGGCACAGGTAGAAATTGAGGTCA
TTCAGTGCAAGTCTTTATAATCTGACATGTACATTCTCTAGAAATACCAA
TTTGTTGTCTCAAGCTATTATTATTTTGATGATGGAAAGAATGAGATTGT
TTGGCCAATTGTTCCTGTGTAAGACTTACAACCTTCCTGGTATACAAATA
TTCTGTGGCACTACCCTCACTAAGGGGTCCAGGCAATTGAGTATGAGCTC
TTAAATGGCCTACAAAATAAGGAACTGTACGTTCTCTTAAATAGAGCTGT
TTTTGCATAAATAATTGCAAAATTTGAGAATTAGCAGTATGTAATAAGGA
ACAGTTTCAAGTAGTTTTAAACCATGGGGTATATATTGGCTGATGGTACA
CAATTAAAAGCTTGATTTTTCGCC

Query= MSMg01no522_m19.b1 MSMg01no522_m19.b1 CHROMAT_FILE:
MSMg01no522_m19.b1 PHD_FILE: MSMg01no522_m19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:56:30 2005
         (562 letters)



>mm_chrX_4751203_4752164
          Length = 962

 Score =  973 bits (503), Expect = 0.0
 Identities = 545/559 (97%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattctcacccgatgaatacggaatggctgagaagtgcctgataaaatgttcagtatc 63
           |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctcacctgaggaatacggaatggctgagaagtgcctgataaaatgttcagtatc 263

                                                                       
Query: 64  cttaatcatcagggaaatgcaaatcaaaacaaacctgagattccacctcacaccagtctg 123
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 264 cttaatcatcagggaaatgcaaatcaaaacaaacctgagattccacctcacagcagtctg 323

                                                                       
Query: 124 aatggctaagatcaaaaattcaggtgacagcagacgctggcgaggatgtggagaaggagg 183
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 324 aatggctaagatcaaaaattcaggtgacagcagatgctggcgaggatgtggagaaggagg 383

                                                                       
Query: 184 aacactcctccattgttggtgggattgcaagcttgtacgaccactgtggaaatcattctg 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  
Sbjct: 384 aacactcctccattgttggtgggattgcaagcttgtacgaccactgtggaaatcattcaa 443

                                                                       
Query: 244 gtggttcctcaggaaattggacatagtactaccagaggatgccgcaatactgtgggcatg 303
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 444 gtggttcctcaggaaattggacatagtactaccagaggatgccacaatactgtgggcatg 503

                                                                       
Query: 304 taaatgtgtgtttctctagtgtacagtgatggcagtgtgaatgtgagtgtgtgtttctct 363
           ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 504 taaatgtgtgtttctctagcgtacagtgatggcagtgtgaatgtgactgtgtgtttctct 563

                                                                       
Query: 364 agagtgtaggaagtcttttggtatgtgaaaatgtttttttgtagagtgatgacagcaatg 423
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 564 agagtgtaggaagtcttttggtatgtgaaaatgtttttttgtagagtgaggacagcaatg 623

                                                                       
Query: 424 ggcatttctatgtgtttttctgtacagtgcagtctgcagattcttatgcataattggttc 483
           |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||
Sbjct: 624 ggcatttctatgtgtttttctgtacagtgcagtctgcagactcttatgaataattgtttc 683

                                                                       
Query: 484 tgtagagtgcattgacggcagtggacatgtgaatgtgtgtttctattgggggcatgatag 543
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tgtagagtgcattgatggcagtggacatgtgaatgtgtgtttctattgggggcatgatag 743

                              
Query: 544 cagtgggcattgacatgtg 562
           |||||||||||||||||||
Sbjct: 744 cagtgggcattgacatgtg 762


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 562
Length of database: 962
Length adjustment: 10
Effective length of query: 552
Effective length of database: 952
Effective search space:   525504
Effective search space used:   525504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)