Query= MSMg01no522_n18.b1 MSMg01no522_n18.b1 CHROMAT_FILE:
MSMg01no522_n18.b1 PHD_FILE: MSMg01no522_n18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:56:35 2005
(616 letters)
>mm_chrX_73786518_73787532
Length = 1015
Score = 1139 bits (589), Expect = 0.0
Identities = 607/613 (99%), Gaps = 1/613 (0%)
Strand = Plus / Plus
Query: 4 ggaattctctacatatgcatccttctatgtgctcccaagaagaaaaataagcatctaatt 63
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 204 ggaattctctacatatgcatccttctatgtgctcccaagaagaaaaataaggatctaatt 263
Query: 64 taagaaaggccaaagggaactcatgttcctgaagtcaacaatctactgaattgggaaaac 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 taagaaaggccaaagggaactcatgttcctgaagtcaacaatctactgaattgggaaaac 323
Query: 124 ttacaattaacaaaaagaaaactcccctttttctgatcaataaataccattgaagggcac 183
|||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttacaattaa-aaaaaaaaaactcccctttttctgatcaataaataccattgaagggcac 382
Query: 184 tatgggtttatcttttaataatcctttgttagtaccatagattgcatttgtagcatgagc 243
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tatgggtttagcttttaataatcctttgttagtaccatagattgcatttgtagcatgagc 442
Query: 244 tgtaggttatacttgttaaagatgggctcagcagaagtcaatgtgtatatctacataaat 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tgtaggttatacttgttaaagatgggctcagcagaagtcaatgtgtatatctacataaat 502
Query: 304 atatgctgtagttgagctgaagataaagagacagagccacatgaggccagaaattcttaa 363
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gtatgctgtagttgagctgaagataaagagacagagccacatgaggccagaaattcttaa 562
Query: 364 tggacattctccttcacctaatcaaatggaggctattaagtattagtaatgaggagagtg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 tggacattctccttcacctaatcaaatggaggctattaagtattagtaatgaggagagtg 622
Query: 424 gatttcacctcatacctgagatatactctgaaatgaaagctcaaattatcagttttaggt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 gatttcacctcatacctgagatatactctgaaatgaaagctcaaattatcagttttaggt 682
Query: 484 gcaggcaaattgtaggtataaattaaaggaaatggagacagtcaggcaagtgaagtcatc 543
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 683 gcaggcaaattgtaggtatagattaaaggaaatggagacagtcaggcaagtgaagtcatc 742
Query: 544 caaatgaatatttggaaaacatttaggggagtgtctaagagtctttaatagtagtacttg 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 caaatgaatatttggaaaacatttaggggagtgtctaagagtctttaatagtagtacttg 802
Query: 604 gacagttgcaata 616
|||||||||||||
Sbjct: 803 gacagttgcaata 815
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1015
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1005
Effective search space: 609030
Effective search space used: 609030
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no522_n18.g1 MSMg01no522_n18.g1 CHROMAT_FILE:
MSMg01no522_n18.g1 PHD_FILE: MSMg01no522_n18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:56:35 2005
(643 letters)
>mm_chrX_73945684_73946726
Length = 1043
Score = 1036 bits (536), Expect = 0.0
Identities = 539/540 (99%)
Strand = Plus / Minus
Query: 1 acttctagtctgatctttggggtcctcccttcctaggtgaggctctgctcaacttctaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 acttctagtctgatctttggggtcctcccttcctaggtgaggctctgctcaacttctaat 481
Query: 61 gttcccaggctcatgactgcagttgtctgtaaagctagcaatggtcaaagtgaagacaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 gttcccaggctcatgactgcagttgtctgtaaagctagcaatggtcaaagtgaagacaat 421
Query: 121 gggttttcctttgggtgatttcagagtcttgatcatgcttgaagaagaaagaagtgctca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 gggttttcctttgggtgatttcagagtcttgatcatgcttgaagaagaaagaagtgctca 361
Query: 181 gcaagattccttgagtcaggcaaggagaatcacatccatagtactgcctgggtgaacaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 gcaagattccttgagtcaggcaaggagaatcacatccatagtactgcctgggtgaacaca 301
Query: 241 gaaaaatggggacgttattctctaagtctatacatatttttagataaaagtcttttagat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 gaaaaatggggacgttattctctaagtctatacatatttttagataaaagtcttttagat 241
Query: 301 atgggcacattcctgatatgctttaaatgaaatatgtataggctaggaagatgattcagt 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 240 atgggcacattcctgatatgctttaaatgaaatatgtataggctaggaagatgattcaat 181
Query: 361 gggtaagatgctcttgtctacaagcatgaagacatgagtttgaatcatcaaaacctatgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 gggtaagatgctcttgtctacaagcatgaagacatgagtttgaatcatcaaaacctatgt 121
Query: 421 aaagttggactcagccatggtttatcccttggccagcaactgcctaacagcacctgatat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 aaagttggactcagccatggtttatcccttggccagcaactgcctaacagcacctgatat 61
Query: 481 aatgacaacaaaatcacagctatcttagtaaacatttggctatatttccaatatttgaac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 aatgacaacaaaatcacagctatcttagtaaacatttggctatatttccaatatttgaac 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1043
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1033
Effective search space: 653889
Effective search space used: 653889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
