Query= MSMg01no525_d04.b1 MSMg01no525_d04.b1 CHROMAT_FILE:
MSMg01no525_d04.b1 PHD_FILE: MSMg01no525_d04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:59:43 2005
(657 letters)
>mm_chrX_64624087_64625144
Length = 1058
Score = 1243 bits (643), Expect = 0.0
Identities = 652/655 (99%), Gaps = 1/655 (0%)
Strand = Plus / Minus
Query: 4 ggaattctgttaattactaaataaaaatgaaaattttaggaaaagtgatgaaggtggaaa 63
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 ggaattctgttaagtactaaataaaaatgaaaattttaggaaaagtgatgaaggtggaaa 719
Query: 64 aaatgttctgaatgagataacttaggtccagaaagataaatatcatatgttctttctcat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 aaatgttctgaatgagataacttaggtccagaaagataaatatcatatgttctttctcat 659
Query: 124 gtgtggtttctaagttcaatatttttagatttatatgcttaagttggactaaatctatat 183
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 gtgtggtttctgagttcaatatttttagatttatatgcttaagttggactaaatctatat 599
Query: 184 agctgccagggaatgagaaatgattcatgagatcttcttgtatgggataatgtcattggt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 agctgccagggaatgagaaatgattcatgagatcttcttgtatgggataatgtcattggt 539
Query: 244 aagaaggaagtgaaacacatatgatataaaactatagcagagt-ggggggatacactaaa 302
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 538 aagaaggaagtgaaacacatatgatataaaactatagcagagtgggggggatacactaaa 479
Query: 303 ggtagacagttataaatggtgatgggaatgggggtaaaggggcaaagtggaggttgaaaa 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 ggtagacagttataaatggtgatgggaatgggggtaaaggggcaaagtggaggttgaaaa 419
Query: 363 ggaagttaaacataactaatgatgtgtggaaaagtatggaagctcattactacaaaaagt 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 ggaagttaaacataactaatgatgtgtggaaaagtatggaagctcattactacaaaaagt 359
Query: 423 aaaaatacgacttagtttttttcctccaattttttaggtatttacttcatttacatttca 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 aaaaatacgacttagtttttttcctccaattttttaggtatttacttcatttacatttca 299
Query: 483 aatgctatcccgaaagtcccctacaccctaccccctccctgctcccctacccatccattc 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 aatgctatcccgaaagtcccctacaccctaccccctccctgctcccctacccatccattc 239
Query: 543 ccacttcttggccctagtgtttcccctgtactggggcatataaagtttgcatgaccaagg 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 ccacttcttggccctagtgtttcccctgtactggggcatataaagtttgcatgaccaagg 179
Query: 603 ggcctctcttcccaatgatggccaactaggccatcttctgctaaaaatgcagcta 657
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 ggcctctcttcccaatgatggccaactaggccatcttctgctaaaaatgcagcta 124
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1058
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1048
Effective search space: 678056
Effective search space used: 678056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no525_d04.g1 MSMg01no525_d04.g1 CHROMAT_FILE:
MSMg01no525_d04.g1 PHD_FILE: MSMg01no525_d04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:59:43 2005
(627 letters)
>mm_chrX_64549787_64550814
Length = 1028
Score = 1183 bits (612), Expect = 0.0
Identities = 624/628 (99%), Gaps = 1/628 (0%)
Strand = Plus / Plus
Query: 1 ataggaagagctggtaaggattccattttctcctattttaaatcatgttaataaccagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ataggaagagctggtaaggattccattttctcctattttaaatcatgttaataaccagat 260
Query: 61 tgaattcctatataaatgtttggtaaaaa-tttctagatggaggaatatgactcaaggct 119
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 261 tgaattcctatataaatgtttggtaaaaaatttctagatggaggaatatgactcaaggct 320
Query: 120 tttcctttgaaggaggtttgtaatcattgatcaatatatctattgttttatatttttatt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttcctttgaaggaggtttgtaatcattgatcaatatatctattgttttatatttttatt 380
Query: 180 tgtatttaatttgtattctatttttgtatgtgtatatcaccatgatatgcaagcatatat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtatttaatttgtattctatttttgtatgtgtatatcaccatgatatgcaagcatatat 440
Query: 240 gtattcaggttcataaatatgtaagcatacatgcagttgtgtgtatttatgtatgtacat 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtattcaggttcataaatatgtaagcatacatgcagttgtgtgtatttatgtatgtacat 500
Query: 300 attcatacagaagtcagagtttgaagctctgtgttcccatgatcacttcctacttcttat 359
||||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||
Sbjct: 501 attcatacagaagtcagagtttgaagctctgtgtttccatgatcgcttcctacttgttat 560
Query: 360 tttatttaggaagagtcattaactaaacctggagtttggcaatctggctagtcttgctag 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttatttaggaagagtcattaactaaacctggagtttggcaatctggctagtcttgctag 620
Query: 420 tttgcctcaaggcttctcctgtctctaccttctgtgaatccaagctgtcagcatgtctgc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tttgcctcaaggcttctcctgtctctaccttctgtgaatccaagctgtcagcatgtctgc 680
Query: 480 ctggtgtttatacaggtgctgagtgaggacctgaactcaggaccacatgtttgtgttgca 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctggtgtttatacaggtgctgagtgaggacctgaactcaggaccacatgtttgtgttgca 740
Query: 540 agtgttttatctacttagccatcgcccaagacttgtgcatacatttctagttctttgttt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 agtgttttatctacttagccatcgcccaagacttgtgcatacatttctagttctttgttt 800
Query: 600 cattatacttttattttttgaaattaag 627
||||||||||||||||||||||||||||
Sbjct: 801 cattatacttttattttttgaaattaag 828
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1028
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1018
Effective search space: 628106
Effective search space used: 628106
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
