Query= MSMg01no525_h22.b1 MSMg01no525_h22.b1 CHROMAT_FILE:
MSMg01no525_h22.b1 PHD_FILE: MSMg01no525_h22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:08 2005
(616 letters)
>mm_chrX_59572521_59573537
Length = 1017
Score = 658 bits (340), Expect = 0.0
Identities = 346/348 (99%), Gaps = 1/348 (0%)
Strand = Plus / Minus
Query: 5 gaattctattcattttattacctgaacagtgtcattttcaagtaaatataccattttatt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 gaattctattcattttattacctgaacagtgtcattttcaagtaaatataccattttatt 289
Query: 65 catcctttcatcaattcactgagagatgggaacataaccttactaagtataatgaataat 124
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 288 catcctttcatcaattcactgagaaatgggaacataaccttactaagtataatgaataat 229
Query: 125 agagctgtgg-aaaaaatctaaaacaaaacaaacaacaaatcaaagataatatgttccac 183
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 agagctgtggaaaaaaatctaaaacaaaacaaacaacaaatcaaagataatatgttccac 169
Query: 184 taaagaaatctcaatagtcctattgaaatgttttataatgagagtaacctagatgaaccc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 taaagaaatctcaatagtcctattgaaatgttttataatgagagtaacctagatgaaccc 109
Query: 244 caggacatatagcttaaaataatcatcataaacatgatttgaaaactcaaggactttaaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 caggacatatagcttaaaataatcatcataaacatgatttgaaaactcaaggactttaaa 49
Query: 304 aatgacacacagaaatatctcaaggaacttaaagaatataggagcaat 351
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48 aatgacacacagaaatatctcaaggaacttaaagaatataggagcaat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1017
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1007
Effective search space: 610242
Effective search space used: 610242
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no525_h22.g1 MSMg01no525_h22.g1 CHROMAT_FILE:
MSMg01no525_h22.g1 PHD_FILE: MSMg01no525_h22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:08 2005
(507 letters)
>mm_chrX_59414127_59415032
Length = 906
Score = 957 bits (495), Expect = 0.0
Identities = 504/507 (99%), Gaps = 1/507 (0%)
Strand = Plus / Plus
Query: 1 tttgtttagctctgtatcccattttttaatggggttatttgaatttctggagtccagctt 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgtttagctctgtatccaattttttaatggggttatttgaatttctggagtccagctt 260
Query: 61 cttgagttctttgtatatattggatattagtccgctatctgatttaggaatggtaaaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttgagttctttgtatatattggatattagtccgctatctgatttaggaatggtaaaaat 320
Query: 121 ccataaagggatttttaaaaaatatttgcacccatttgaatttattaactcagggataca 180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccataaagggattttt-aaaaatatttgcacccatttgaatttattaactcagggataca 379
Query: 181 ggtagaccttcagaatttttgttacataataagtatatacacttattacattccaatatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ggtagaccttcagaatttttgttacataataagtatatacacttattacattccaatatt 439
Query: 241 ataaaggagagtgatacaagttttgtaaataattttttataaacatagacatatactgtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ataaaggagagtgatacaagttttgtaaataattttttataaacatagacatatactgtg 499
Query: 301 tgattaacaagtatttatttggtgtagaaagttttattatgtgaagatattacaatttaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tgattaacaagtatttatttggtgtagaaagttttattatgtgaagatattacaatttaa 559
Query: 361 tgcttttaattgatttcctcaactcttcctgtttttaaaggacaggattaaaatgtctaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tgcttttaattgatttcctcaactcttcctgtttttaaaggacaggattaaaatgtctaa 619
Query: 421 tagctcagggttctatattgtttttgtaaatgtgacttggagttaattacttaattttag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tagctcagggttctatattgtttttgtaaatgtgacttggagttaattacttaattttag 679
Query: 481 taaagggtgcttgaaattaattccatt 507
|||||| ||||||||||||||||||||
Sbjct: 680 taaaggttgcttgaaattaattccatt 706
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 507
Length of database: 906
Length adjustment: 10
Effective length of query: 497
Effective length of database: 896
Effective search space: 445312
Effective search space used: 445312
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
