NNTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCATGGGTCCTTTCTCTAGATCCTTCATTGGAGACCCTGTGCTC
CATCCAATGGATGGCTGTGAGCATCCACTTCTGTATTTGCCAGGAACTGG
CAGAGCCTCTCAGGAGAAAGCCTTATCAGGCACGAGTTGGCAACTGCCAT
AGTGTCTGGGTTTGGTGGTTGTTTTTGGGATGGATCCCCAAGTGGGGCAG
TCTCTGGATGGTCTGTCCTTCAGTATCTGCTCTGAAATTTGTCTCTGTAA
CTCCTTCCGTGGGTATTTTGTTCCCCCTTCAAAAAAGATTCTGAGCTTCT
GGGCTAATATCCACTTATCAATGAGTGCATATCATGTGTGTTCTTTTGTG
ACTGAGTTACCTCACTTAGGATGATATCATCCAGATCCATCCATTTGCCT
AAAAATTTCATAAATTCATTGTTTAATAGCTGTGTAGTAATCCATTGTAT
AAATGTACCACATATTCTGTATCCATTCCTCTGTAGAGGGACATCTGGGT
TTTTTCCAGCTTCTTGCTATTAAAAATAAGGCTGCTATGAACATAGTTGA
GCACTTATTACAAGGTGGAGCATATTCTGGGTGTTTGCCCAGGAGTGGTA
TTCCTAGATCATGCTGTAGAATTATGTCCAATTTTCTGAGGAACTGCCAG
ACTGATTTCCAGAGTGGTTTTACAAGCTTGCAATCCCACCAACAATGGAG
GAGTGTTCTTCTTTTCTCACN

NCCAATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXACAGAAGATGTAGTTACATGTATA
GACCTGCGCAAGACTGGGCTTGTCAATAGTTAGTCATGGATGGAGGAGAG
GCTCATAGAAACCCTACCTTTCACACTGAACTACTGGCTACTGATAAGTT
GTAGAGGTGGGGTTAGCATCTTTAGATGTGTGTCCACTAGTGAGCCCACC
AGGCTCAGTTTTATAGTTCTCTAACCACGATCACATACACATCCTTGGTT
AAACTCACTGTCTTACAAAGAAAAAAAAAAGGTAATCAACATGGAGAACA
GTCCCGTAGCATAGGAGAAGATTGTAGGTAAATAATGGAGGATTGGGAGT
TAGTGTAATAAGAATGCATTATATACATGCATGAAGTTGTCAAAGAACAA
ATTTAATTATACAAAGGAGCAACAACCTTGGACTAATCCCAAACTGAATT
TGAACTTTGTTGGTGACACTAGAGGTCTTCAGAAGCCTCATTAATCAAGG
GGAAGTAATACTAATTGTTTATAGTAGGATTGAATTTATTGCTCCTATTA
AACAAAGGCTGGGTAAACTTAACGGCATATAACCCTAAATTTCCTCCCAC
TCCTTCTCATCCCTGTGCTACTTCCAGATGCAACTCAACCTACTACACCC
ACGTTGCCAAATTCTAACAAAACACTTTTTTGAAATAATTTTCTCTGTGG
ACAACTTGTAGAAGAAA

Query= MSMg01no528_m17.g1 MSMg01no528_m17.g1 CHROMAT_FILE:
MSMg01no528_m17.g1 PHD_FILE: MSMg01no528_m17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:30 2005
         (650 letters)



>mm_chrX_104497420_104498469
          Length = 1050

 Score = 1195 bits (618), Expect = 0.0
 Identities = 642/650 (98%), Gaps = 3/650 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   acagaagatgtagttacatgtatagacctgcgcaagactgggcttgtcaatagttagtca 60
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 204 acagaagatgtagttacatgtatagacctg-gcaagactgggcttgtcaatagttagtca 262

                                                                       
Query: 61  tggatggaggagaggctcatagaaaccctacctttcacactgaactactggctactgata 120
           |||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 263 tggatggaggagaggctcat-gtaaccctacctttcacactgaactactggctactgata 321

                                                                       
Query: 121 agttgtagaggtggggttagcatctttagatgtgtgtccactagtgagcccaccaggctc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 agttgtagaggtggggttagcatctttagatgtgtgtccactagtgagcccaccaggctc 381

                                                                       
Query: 181 agttttatagttctctaaccacgatcacatacacatccttggttaaactcactgtcttac 240
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 382 agttttatagttctctaaccacgatcacatacgcatccttggttaaactcactgtcttac 441

                                                                       
Query: 241 aaagaaaaaaaaaaggtaatcaacatggagaacagtcccgtagcataggagaagattgta 300
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 aaagaaaaaaaaa-ggtaatcaacatggagaacagtcccgtagcataggagaagattgta 500

                                                                       
Query: 301 ggtaaataatggaggattgggagttagtgtaataagaatgcattatatacatgcatgaag 360
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 501 ggtaaataatggaggattgggagttagtgtaataagaatgcattaaatacatgcatgaag 560

                                                                       
Query: 361 ttgtcaaagaacaaatttaattatacaaaggagcaacaaccttggactaatcccaaactg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttgtcaaagaacaaatttaattatacaaaggagcaacaaccttggactaatcccaaactg 620

                                                                       
Query: 421 aatttgaactttgttggtgacactagaggtcttcagaagcctcattaatcaaggggaagt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aatttgaactttgttggtgacactagaggtcttcagaagcctcattaatcaaggggaagt 680

                                                                       
Query: 481 aatactaattgtttatagtaggattgaatttattgctcctattaaacaaaggctgggtaa 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aatactaattgtttatagtaggattgaatttattgctcctattaaacaaaggctgggtaa 740

                                                                       
Query: 541 acttaacggcatataaccctaaatttcctcccactccttctcatccctgtgctacttcca 600
           ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 acttaacagcatataaccttaaatttcctcccactccttctcatccctgtgctacttcca 800

                                                             
Query: 601 gatgcaactcaacctactacacccacgttgccaaattctaacaaaacact 650
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gatgcaactcaacctactacacccacgttgccaaattctaacaaaacact 850


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1050
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1040
Effective search space:   665600
Effective search space used:   665600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)