Query= MSMg01no529_k22.b1 MSMg01no529_k22.b1 CHROMAT_FILE:
MSMg01no529_k22.b1 PHD_FILE: MSMg01no529_k22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:05:45 2005
(569 letters)
>mm_chrX_138617072_138618040
Length = 969
Score = 1062 bits (549), Expect = 0.0
Identities = 562/567 (99%), Gaps = 2/567 (0%)
Strand = Plus / Minus
Query: 5 gaattcagtatttgtgctttctactttaattgtgtgcaatggcaagttcttgccttgcaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 830 gaattcagtatttgtgctttctactttaattgtgtgcaatggcaagttcttgccttgcaa 771
Query: 65 aaacagaggccagagagcatccagtttcaacgtttccatttctttttaatctcaaaatga 124
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 770 aaacagaggccagagagcatccagtttcaacatttccatttctttttaatctcaaaatga 711
Query: 125 gaaggaaggcttggactggatacttttaagttgtctttccagttttggaaatttggaact 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 gaaggaaggcttggactggatacttttaagttgtctttccagttttggaaatttggaact 651
Query: 185 ttttttttttttaaacaatgtcactcatatgtgcccacaaagaaaaaaatagagattcag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 ttttttttttttaaacaatgtcactcatatgtgcccacaaagaaaaaaatagagattcag 591
Query: 245 attgagtggtaagataatggcagtcagtatcacatacaggcttgttagtatctactcacg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 attgagtggtaagataatggcagtcagtatcacatacaggcttgttagtatctactcacg 531
Query: 305 taagagtgtagcttccaattgttcggctttccgaatagtgcaaatgtgcccatttctctt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 taagagtgtagcttccaattgttcggctttccgaatagtgcaaatgtgcccatttctctt 471
Query: 365 atatacctcatggaacatttaaaaatgcaggaatgcagagtctttcttcctaggaatttg 424
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 atataccacatggaacatttaaaaatgcaggaatgcagagtctttcttcctaggaatttg 411
Query: 425 ctagcatgcagacatccatgtaaacaatgtttagtgtgtgtgtgtgtg--tgagtgtgtg 482
|||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 410 ctagcatgcagacatccatgtaaacaatgtttagtgtgtgtgtgtgtgagtgtgtgtgtg 351
Query: 483 tgtgtgtgtgtgtgtgctcatgtgtatcaggataaacagtaaatagcacacagtctctga 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 tgtgtgtgtgtgtgtgctcatgtgtatcaggataaacagtaaatagcacacagtctctga 291
Query: 543 ccctaagaagtctgcaatttcatagaa 569
|||||||||||||||||||||||||||
Sbjct: 290 ccctaagaagtctgcaatttcatagaa 264
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 969
Length adjustment: 10
Effective length of query: 559
Effective length of database: 959
Effective search space: 536081
Effective search space used: 536081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no529_k22.g1 MSMg01no529_k22.g1 CHROMAT_FILE:
MSMg01no529_k22.g1 PHD_FILE: MSMg01no529_k22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:05:45 2005
(631 letters)
>mm_chrX_138453482_138454512
Length = 1031
Score = 1210 bits (626), Expect = 0.0
Identities = 629/630 (99%)
Strand = Plus / Plus
Query: 1 ttccaaagcctgccctattagacttgctgtaaataatgaggtaatttagcttgttagaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttccaaagcctgccctattagacttgctgtaaataatgaggtaatttagcttgttagaat 260
Query: 61 atgattcttaatatgtgaatagaaatggaatcccagtgtagtggtgcctaaatgaggaga 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 261 atgattcttaatatgtgaatagaaatggaatcccagtgtagtggtgcctaaatgagaaga 320
Query: 121 gaatatgctgccttatctagttttttttcttttgttagagaatatgtgctaattagaagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaatatgctgccttatctagttttttttcttttgttagagaatatgtgctaattagaagc 380
Query: 181 acataatactacttctatcttataaacaattgcttaacttaacaacttcaactatgtaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acataatactacttctatcttataaacaattgcttaacttaacaacttcaactatgtaaa 440
Query: 241 gaatttccttaaaacaacacaccttggctgaccgctctgcctccgtcaaccttgatatct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaatttccttaaaacaacacaccttggctgaccgctctgcctccgtcaaccttgatatct 500
Query: 301 ccatctgtgggatgaaagactggagctgacttaattactaaaggccctttaggttctgac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccatctgtgggatgaaagactggagctgacttaattactaaaggccctttaggttctgac 560
Query: 361 actgactgtctcttctattttcagttcccaggtgttattttcagagaagtatattgaaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 actgactgtctcttctattttcagttcccaggtgttattttcagagaagtatattgaaca 620
Query: 421 aaatcttgaagggtcttgtggaaaagttttgttggacccagggaataaaatgttggcttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaatcttgaagggtcttgtggaaaagttttgttggacccagggaataaaatgttggcttg 680
Query: 481 gtgactgttagtccctataaataacgttattttaattcttttctagggtagcataaagca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gtgactgttagtccctataaataacgttattttaattcttttctagggtagcataaagca 740
Query: 541 gtgtaaaacgctggtgagatcttaaatttggatcatatattacagtgtttctcaagagcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gtgtaaaacgctggtgagatcttaaatttggatcatatattacagtgtttctcaagagcc 800
Query: 601 agcatggacatgctggtccaaatttctcct 630
||||||||||||||||||||||||||||||
Sbjct: 801 agcatggacatgctggtccaaatttctcct 830
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1031
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1021
Effective search space: 634041
Effective search space used: 634041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
