AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CTTTGTTCAGCTCTGAGCCCCATTTTATAATGGGGTTATTTGATTTTCTG
GAGTCCACCTTCTTGAGTTCTTTATATATATTGGATATTAGTCCCCTATC
CGATTTGGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGCCTTTTTG
TCTTATTGACGGTGTCTTTTGCTTTGCAGAAGCTTTGCAATTTTATGAGG
TCCCATTTATCGATTCTTGATCTTACAGCACAAGCCATTGCTGTTCTATT
CAGGAATTTTTCCCCTGTACCCATATCTTCGAGGCTTTTCCCTACTTTCT
CCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGGAGTTCCTTAATCCAC
TTAGATTTGACCTTAGTACAAGGAGATAGAAATGGATCAATTCGCATTTT
TCTACACGATAACCGCCAGTTGTGCCAGCACCATTTGTTGAAAATGCTGT
CTTTTTTCCACTGGATGGTTTTAGCTCCCTTGTCAAAGATCAAGTGACCA
TAGGTGTGTGGGTTCATCTGTGGGTCTTCAATTCTGTTCCATTGGTCTAC
TTGTCTGTCACTATACCAATACCATGCAGTTTTTATCACAATTGCTCTGT
AGTACAACTTTAGGTCTGGCATGGTGATTCCACCAGAGGTTCTTTTATCC
TTGAGAAGAGTTTTTGCTATCCTAGGTTTN

ACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXCCTGCCCCAGTGGCTGCATCTTACTTGCATG
TCTCACCACTCTCTGCACGTTATATGCCCTTGGCACTATCCTACAAACTC
TGGAGGGACAAACCACCACATCAAATTTTTTTCTGCAAACACTCACACAA
CTTCAGTATGTCTGCCTACCTCATTCTGCATATGGGAGACAATGCTATTT
GCAGTTTCACTCCCCAATCCATTATTGATTTTGTTGTGTCCTCTCGACTA
TGCCAAGGGTTGCTAAAGTTCCTTTCCCTGAGATAGACTTAAAGGAACAT
CTATCCCTGCTCCTGAGGTCCCAACAACAAAGTGACCAAAGAAACAATTC
ACCCAAGGTTTACTCTGGGGAACCAGTGAGTTTATTAAGCTTCCTCACCG
AGGCAAGATGAGGAGTTACTTACAGGAATGTGGGCACCTCTCCTCCAACT
GGCCCTACTTGAAAAGCTTTACTCAATAGGCATACACACACACACACACA
CTTCTTTTGGGCCAGGTACAGAGTTGTCACTTTCATTGTGAGCAGTTGGA
GCAATTGGGAGTAGTTGGAGCTTGGTAACAAGCACAGTTGGGATAATCTT
TTCAATAGAGGACACAGAATACCACCACCAAGATGGTAGTTACTTGCCTT
GAAAGGCAGTCACTCACAATATATATG

Query= MSMg01no534_i02.g1 MSMg01no534_i02.g1 CHROMAT_FILE:
MSMg01no534_i02.g1 PHD_FILE: MSMg01no534_i02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:12:03 2005
         (658 letters)



>mm_chrX_33937164_33938221
          Length = 1058

 Score = 1180 bits (610), Expect = 0.0
 Identities = 653/684 (95%), Gaps = 26/684 (3%)
 Strand = Plus / Plus

                                                                       
Query: 1   cctgccccagtggctgcatcttacttgcatgtctcaccactctctgcacgttatatgccc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 cctgccccagtggctgcatcttacttgcatgtctcaccactctctgcacgttatatgccc 234

                                                                       
Query: 61  ttggcactatcctacaaactctggagggacaaaccaccacatcaaatttttttctgcaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 ttggcactatcctacaaactctggagggacaaaccaccacatcaaatttttttctgcaaa 294

                                                                       
Query: 121 cactcacacaacttcagtatgtctgcctacctcattctgcatatgggagacaatgctatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 cactcacacaacttcagtatgtctgcctacctcattctgcatatgggagacaatgctatt 354

                                                                       
Query: 181 tgcagtttcactccccaatccattattgattttgttgtgtcctctcgactatgccaaggg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 tgcagtttcactccccaatccattattgattttgttgtgtcctctcgactatgccaaggg 414

                                                                       
Query: 241 ttgctaaagttcctttccctgagatagacttaaaggaacatctatccctgctcctgaggt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 ttgctaaagttcctttccctgagatagacttaaaggaacatctatccctgctcctgaggt 474

                                                                       
Query: 301 cccaacaacaaagtgaccaaagaaacaattcacccaaggtttactctggggaaccagtga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 cccaacaacaaagtgaccaaagaaacaattcacccaaggtttactctggggaaccagtga 534

                                                                       
Query: 361 gtttattaagcttcctcaccgaggcaagatgaggagttacttacaggaatgtgggcacct 420
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 gtttattaagcttcctcactgaggcaagatgaggagttacttacaggaatgtgggcacct 594

                                                                       
Query: 421 ctcctccaactggccctacttgaaaagctttactcaataggcatacacacacacacacac 480
           ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||
Sbjct: 595 ctcctccaactggccctacttgagaagctttactcaataggcacacacacacacacacac 654

                                                                       
Query: 481 ac--------------------------ttcttttgggccaggtacagagttgtcacttt 514
           ||                          ||||||||||||||||||||||||||||||||
Sbjct: 655 acacacacacacacacacacacacacacttcttttgggccaggtacagagttgtcacttt 714

                                                                       
Query: 515 cattgtgagcagttggagcaattgggagtagttggagcttggtaacaagcacagttggga 574
           | |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 715 cgttgtgagcagttggagcaattgggagtagttggagcttggtaacaagcgcagttggga 774

                                                                       
Query: 575 taatcttttcaatagaggacacagaataccaccaccaagatggtagttacttgccttgaa 634
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 taatcttttcaatagaggacacagaataccaccaccaagatggtagttacttgccttgaa 834

                                   
Query: 635 aggcagtcactcacaatatatatg 658
           ||||||||||||||||||||||||
Sbjct: 835 aggcagtcactcacaatatatatg 858


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1058
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1048
Effective search space:   679104
Effective search space used:   679104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)