Query= MSMg01no536_c22.b1 MSMg01no536_c22.b1 CHROMAT_FILE:
MSMg01no536_c22.b1 PHD_FILE: MSMg01no536_c22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:14:13 2005
(534 letters)
>mm_chrX_164172705_164173638
Length = 934
Score = 940 bits (486), Expect = 0.0
Identities = 522/534 (97%)
Strand = Plus / Plus
Query: 1 aactatcctccaacatcagcttacatttgaagtagctagtattcgtgcttcttggctcta 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aactatcctccaacatcagattacatttgaagtagctagtattcgtgcttcttggctcta 260
Query: 61 gattcacatacaaaggagttaaggtaaaagggcgaagacagggagagaggaaaattaaca 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggttcacatacaaaggagttaaggtaaaagggcgaagacagggagagaggaaaattaaca 320
Query: 121 ccaggagatgggtctgaatagatttttaaaattccaagttttggtgatagccatgacact 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acaggagatgggtctgaatagatttttaaaattccaagttttggtgatagccatgacact 380
Query: 181 tttgtgcctcacatggtataatctgcagtggttggagaagaaccctcaccatgacctcta 240
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttgtgcctcacatagtataatctgcagtggttggagaagaaccctcaccatgacctcta 440
Query: 241 gggatgcttgtcctgtagtttgctatccccagatcaggtaaagacatgactgacaggtct 300
|||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct: 441 gggatgctagtcctgtagtttgctatccctggatcgggtaaagacatgactgacaggtct 500
Query: 301 gttgatgttgtttatcacaccatccatacacagacatgtcctgaatgtgattacattgtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gttgatgttgtttatcacaccatccatacacagacatgtcctgaatgtgattacattgtt 560
Query: 361 ctctacttctgaacatcactgtccttttatgcagccttcagtgtagtactagggcatttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctctacttctgaacatcactgtccttttatgcagccttcagtgtagtactagggcatttt 620
Query: 421 gatttcatacagcaggtagcagcttgttttcctatggccctttatgggcaggcttcggca 480
|||||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||
Sbjct: 621 gatttcatacagtaggtagcagcttgctttcctatggccctttatgggcaggctttggca 680
Query: 481 ggtacactggaggaaacctgtgtctttcaggtcactaaaacatcaaagccatcc 534
|||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 681 ggtacactggaggaaacctgtgtcattcaggtcactaaaacatcaaagccatcc 734
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 534
Length of database: 934
Length adjustment: 10
Effective length of query: 524
Effective length of database: 924
Effective search space: 484176
Effective search space used: 484176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no536_c22.g1 MSMg01no536_c22.g1 CHROMAT_FILE:
MSMg01no536_c22.g1 PHD_FILE: MSMg01no536_c22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:14:13 2005
(514 letters)
>mm_chrX_164345033_164345946
Length = 914
Score = 797 bits (412), Expect = 0.0
Identities = 430/440 (97%), Gaps = 7/440 (1%)
Strand = Plus / Minus
Query: 1 catatgcaacgtgcctgcttcatgaattttcaaaacacaagaccgtcttggtcattttgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 catatgcaacgtgcctgcttcatgaattttcaaaacacaagaccgtcttggtcattttgt 381
Query: 61 cctagaaaggacacaatgagcctcaatggagtaccaccagagacacatttaagaacatag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cctagaaaggacacaatgagcctcaatggagtaccaccagagacacatttaagaacatag 321
Query: 121 tagctgtattctaatgaagagattctgcaggtactaaagagggttttatgctcagtgcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tagctgtattctaatgaagagattctgcaggtactaaagagggttttatgctcagtgcaa 261
Query: 181 tgctagcaaggctatcaaaataggaatgcatttttatctaaatcacccttacaaacaagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tgctagcaaggctatcaaaataggaatgcatttttatctaaatcacccttacaaacaagg 201
Query: 241 tattaaggtttgaatacgaaacgtctctcacagcatcatgggtttcaacatagaatcctt 300
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 200 tattaaggtttgaatacgaaacgtctctcacagcatcatgggtttcaacagagaatcctt 141
Query: 301 atctggtagagtactattgaattcaacctacagcctttaagtgaggcctagatgaggaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 atctggtagagtactattgaattcaacctacagcctttaagtgaggcctagatgaggaaa 81
Query: 361 gaagccacttggggggggg-------tctaccctacatggtttcaatatagccttatttc 413
| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 80 ggagccactgggggggggggggggcgtctaccctacatggtttcaatatagccttatttc 21
Query: 414 tagtccaagctttctctttg 433
||||||||||||||||||||
Sbjct: 20 tagtccaagctttctctttg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 914
Length adjustment: 10
Effective length of query: 504
Effective length of database: 904
Effective search space: 455616
Effective search space used: 455616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
