NACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCCG
CGGAATTCAAGGCCTTTCCATAATCATGATAAAAGCAATCTACAGCAAAC
CAGTAGCCAAAAACAAAGCAAATGGGGAGAAGGTAGAAGCAATCCCACTA
AAATCAGGAACTAGACAAGGCTACCCACTTTTCTCCTACCTATTCAGCAT
TGTACTTGAAGTCCTACCCAGAGCAATTCAACAACAAAAGGAGATCAAGA
GGATACAAATTAGAAAGGAAGGAGTCAAAATATCACTTTTTGCAGAAGAT
ATGATAGTATATATAAGTGACCCTAAAATTTCTACCAGAGAACTCCTAAA
CCTGATAAACAGCTTCAGTAAAGTAGCTGGATATAAAATTAACTCAAACA
AGTCAATGTCCTTTTTCTACACAAAGGATAAACAGGCTGAGAATGAAATT
AGGGAAACAACACCCTTCAAAATAGCCACAAATAATAAAAGTACCTTGGC
ATGACTCTAACTAAGGAAGTGAAAGATCTGTATGATAAGAACTTCAAGTC
TCTGAAGAAAGAAATTAAAGAAGATCTCAGAAGATGGAAAGATATCCCAT
ACTCATGGATGGGCAGGATTAATATAGTAAAAATGGCTATCTTGCCGAAN
ACAATCTACAGATTCAATGCAATCCCCATCAAAATTCCAACTCAATTCTT
CAACAAATTTGAAAGCACAATCTCTAAATTCATCTGGAATAACAAAAATC
CTAGGATAGC

NCCCATTGATTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXCACCATTCACATTGCTATGCTGA
TTAGTATTGTCATTTTTAAGGTCTCCTTTAGGTGACCACACTGTTGAGAT
TTCATGAGTGTAGTCTCCTTATCACATATATTAAAAAAAAAACCACTATC
ATGGAGCAAACATCATTCATCAACATTGTTAAAAACAAATTTATTCTTTC
CTCACCTTGCTCTATTCTATCTATTCAAATGGTCCTGAGCCTCATTACTT
TCTTGTGTTTTCTATCTCTATCAATGGAAAACTCTCAGAATTAAGTTATC
CATTCAGAGTTGATTTTCAGTCTCTATCCGCCTAACCACAAATATTTAGT
CACTGTATTATTTTGGTATTGCTACAAGGACAAATGAACATAAACTTCTC
AGTAACAACAGAAATTTTTTACTTTGAAATGTAGAATATTAAGAATAAGA
AAATAGAGCCTAGCATAACTGTTTCCTGAGTGGCTTCATCCAGCAGCTGA
TGGAAAAAGACACAGAGACTCACAGCCAAACACCAGGGGCTGCTCTAAGA
GTCTTGTAGAAGACTGGAGGATAAAAATGAGCAAGCCAGAGAGGTCAAGG
ACACAACAAAAAGACCTAGAGTCAAGCAACCTGGGTTTATGAAGGCTCAA
AGAGACTGAACCACCAACCAAAGACCATGCAGGGGCTGGACCTAGACCCC
CT

Query= MSMg01no539_n12.g1 MSMg01no539_n12.g1 CHROMAT_FILE:
MSMg01no539_n12.g1 PHD_FILE: MSMg01no539_n12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:18:56 2005
         (667 letters)



>mm_chrX_59102619_59103684
          Length = 1066

 Score = 1274 bits (659), Expect = 0.0
 Identities = 665/667 (99%), Gaps = 1/667 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   caccattcacattgctatgctgattagtattgtcatttttaaggtctcctttaggtgacc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caccattcacattgctatgctgattagtattgtcatttttaaggtctcctttaggtgacc 260

                                                                       
Query: 61  acactgttgagatttcatgagtgtagtctccttatcacatatattaaaaaaaaaaccact 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 261 acactgttgagatttcatgagtgtagtctccttatcacatatattaaaaaaaaaa-cact 319

                                                                       
Query: 121 atcatggagcaaacatcattcatcaacattgttaaaaacaaatttattctttcctcacct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 atcatggagcaaacatcattcatcaacattgttaaaaacaaatttattctttcctcacct 379

                                                                       
Query: 181 tgctctattctatctattcaaatggtcctgagcctcattactttcttgtgttttctatct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tgctctattctatctattcaaatggtcctgagcctcattactttcttgtgttttctatct 439

                                                                       
Query: 241 ctatcaatggaaaactctcagaattaagttatccattcagagttgattttcagtctctat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ctatcaatggaaaactctcagaattaagttatccattcagagttgattttcagtctctat 499

                                                                       
Query: 301 ccgcctaaccacaaatatttagtcactgtattattttggtattgctacaaggacaaatga 360
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ccgcctaatcacaaatatttagtcactgtattattttggtattgctacaaggacaaatga 559

                                                                       
Query: 361 acataaacttctcagtaacaacagaaattttttactttgaaatgtagaatattaagaata 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 acataaacttctcagtaacaacagaaattttttactttgaaatgtagaatattaagaata 619

                                                                       
Query: 421 agaaaatagagcctagcataactgtttcctgagtggcttcatccagcagctgatggaaaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 agaaaatagagcctagcataactgtttcctgagtggcttcatccagcagctgatggaaaa 679

                                                                       
Query: 481 agacacagagactcacagccaaacaccaggggctgctctaagagtcttgtagaagactgg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 agacacagagactcacagccaaacaccaggggctgctctaagagtcttgtagaagactgg 739

                                                                       
Query: 541 aggataaaaatgagcaagccagagaggtcaaggacacaacaaaaagacctagagtcaagc 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 aggataaaaatgagcaagccagagaggtcaaggacacaacaaaaagacctagagtcaagc 799

                                                                       
Query: 601 aacctgggtttatgaaggctcaaagagactgaaccaccaaccaaagaccatgcaggggct 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 aacctgggtttatgaaggctcaaagagactgaaccaccaaccaaagaccatgcaggggct 859

                  
Query: 661 ggaccta 667
           |||||||
Sbjct: 860 ggaccta 866


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 667
Length of database: 1066
Length adjustment: 10
Effective length of query: 657
Effective length of database: 1056
Effective search space:   693792
Effective search space used:   693792
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)