Query= MSMg01no543_b13.b1 MSMg01no543_b13.b1 CHROMAT_FILE:
MSMg01no543_b13.b1 PHD_FILE: MSMg01no543_b13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:23:21 2005
(701 letters)
>mm_chrX_150277128_150278228
Length = 1101
Score = 833 bits (431), Expect = 0.0
Identities = 434/435 (99%)
Strand = Plus / Minus
Query: 4 ggaattctcttgaaggtaaagtagtgaagctttgcactgttattgtcctggtggatagca 63
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 ggaattctcttgaaagtaaagtagtgaagctttgcactgttattgtcctggtggatagca 376
Query: 64 attctttgagattaaatgtttgtctcttaagagtagatgctatgatatttagtgcataag 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 attctttgagattaaatgtttgtctcttaagagtagatgctatgatatttagtgcataag 316
Query: 124 caattactttcattatatcttcttgacaaattggtcccttgaccattataaggtgatgtt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 caattactttcattatatcttcttgacaaattggtcccttgaccattataaggtgatgtt 256
Query: 184 ctttagctctccttagaggttttgccttgaagattcccattcactttaaaaattccattg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ctttagctctccttagaggttttgccttgaagattcccattcactttaaaaattccattg 196
Query: 244 cctttgaatgtcattttccagacttgccctttaattgtgtgttttaatggtgaactgttt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 cctttgaatgtcattttccagacttgccctttaattgtgtgttttaatggtgaactgttt 136
Query: 304 cccttagacacttgtatcttatattgatgatatatttatttaccttttatccattcagcc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 cccttagacacttgtatcttatattgatgatatatttatttaccttttatccattcagcc 76
Query: 364 aatttatattttttaattgaaatattcaatccatctctgtttaaggttatattatttaat 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 aatttatattttttaattgaaatattcaatccatctctgtttaaggttatattatttaat 16
Query: 424 gttatgcaggtattc 438
|||||||||||||||
Sbjct: 15 gttatgcaggtattc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 701
Length of database: 1101
Length adjustment: 10
Effective length of query: 691
Effective length of database: 1091
Effective search space: 753881
Effective search space used: 753881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no543_b13.g1 MSMg01no543_b13.g1 CHROMAT_FILE:
MSMg01no543_b13.g1 PHD_FILE: MSMg01no543_b13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:23:21 2005
(651 letters)
>mm_chrX_150138869_150139919
Length = 1051
Score = 1162 bits (601), Expect = 0.0
Identities = 629/651 (96%), Gaps = 20/651 (3%)
Strand = Plus / Plus
Query: 1 tgagtcatgggtggatgataggaggaggaagctcagaagcaaagagaaaaagaagctgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgagtcatgggtggatgataggaggaggaagctcagaagcaaagagaaaaagaagctgaa 260
Query: 61 cgagcacagagtgctaattaagatattcctgtgtcttttgaaatgtttaataaagaaaac 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cgagcacagagggctaattaagatattcctgtgtcttttgaaatgtttaataaagaaaac 320
Query: 121 acgaatcaagaaatatctggtgaaaatggagttttgttggaattgagaaaatgtaataat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acgaatcaagaaatatctggtgaaaatggagttttgttggaattgagaaaatgtaataat 380
Query: 181 gtaatatgtaattacaaataatataagagaaatttgaagtaaaacaattgatgttataaa 240
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtaatatgtaattacaaataatgtaagagaaatttgaagtaaaacaattgatgttataaa 440
Query: 241 ggattagctgatagatagcttaggtggtattaagtcacatgaagtagaatttaatctaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggattagctgatagatagcttaggtggtattaagtcacatgaagtagaatttaatctaaa 500
Query: 301 gaagtgctgtctccaaagtaccccaaagatcagtgatatgtgaagcaggactgttagaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaagtgctgtctccaaagtaccccaaagatcagtgatatgtgaagcaggactgttagaga 560
Query: 361 taagtgaaattaacagtgcgaggctgcaatgcttgtttaccaggactaaccagccattag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taagtgaaattaacagtgcgaggctgcaatgcttgtttaccaggactaaccagccattag 620
Query: 421 gcccatcctcacagaacagaacaaaaggcagtgcagagtcacaaccactagtaagtcctg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gcccatcctcacagaacagaacaaaaggcagtgcagagtcacaaccactagtaagtcctg 680
Query: 481 gtctgtcattaagtcccctatgcccttatcaaaaacaaacaaacaaacaaacaaacaaac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gtctgtcattaagtcccctatgcccttatcaaaaacaaacaaacaaacaaacaaac---- 736
Query: 541 aaaaaaacaaacaaaccctataattctgccaggtgggcaagatgaacctgggtaacaact 600
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 ----------------cctataattctgccaggtgggcaagatgaacctgggtaacaact 780
Query: 601 attggaaaggtatatttaagacataattctggcagtgtctttgctgtgtga 651
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 attggaaaggtatatttaagacataattctggcagtgtctttgctgtgtga 831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1051
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1041
Effective search space: 667281
Effective search space used: 667281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
