CCTTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCATTAGATATGCACTCACTGATAAGTGGATATTATCCCAGAAACT
TAGAATAGCCAAGATACAACTTGCAAAACACAAGAAAATCAAGAAGAAAG
AAGACCAACACGTGGACACTTCATTCCTCCTTAGAATAGGAAACAAAATA
CCCATGGAAGGAGTTACAGAGACAAAGATTGAAACTAACATGAAAGGATA
AACCATCCAGAGACTACCCCACCCGGGGATCCATCCCATAATCAGCCACC
AAACCCAGACACTATTGCATATGCCAGAAAGATTTTGCTGAAGGGACCCT
GTTATAGCTGTCTCATATGAGGCTATGCCAGTACCTGGCAAATACAGAAG
TGGATGCTCACAGTCATCTATCAAATGGAACACAGGGCCCCCAATGGAGA
AGCTAGAGAAAGCACCCAAGGTGCTGAAGGGGTATGAAACCCTATAGGTG
GAACAACAATATGAACTAACCAGTACTCCCAGAGCTCGTGTCTCTAGCTG
CATATGTAGCAGAAGATGGCCTAGTTGGCCATCACTGGGAAGAGAGGCCC
CTTGGTATTGCAAACTTTATATGCCCCAGTACAGGGGAATGCCAGGGCCA
AGAAGTGGGAGTGGGTGGGTACGGGAGCAGAGCATAGGGAGGGTATAGGG
AAACTTTCAGATAGTGTTTGAAATGTATATAAAGAAAATATCTAATAAAA
AATGGAAATAAATCAGG

ACGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXCAGGGTTCCTAAGATCTTCCCTC
TCCATACTGTCATGTAACTATTTCAGGTTATTAGTTTGTTTTTCAAAAGA
AGTCTTGTGCCTTTGGGTCCCTGACGATCTCATCTTGGAGGAAGAACAAG
ATTATATGATGATGCTACTATCAGGACCATTTCAGGGATACATGCACTTA
AGATGAAACCTGCAATTTATTAGCTAGTCTAAGAATGGGGGCCTCACAGG
TGATGTGATGTGTCAGCGATGTACTGCTAGCAGGCTGAAGCAGAAAGATT
GCTTGAGCCTGAAACCTGTTTTGTGTGAGCTTTTCCTAGTCAGAAGAACA
AATATGTATTCAGCCCAGATTGGGTACCAATAGCAAACAAAGAAATAATT
ATATTCAGGTATAGATTGGTAACTGAGGTTATTTATAGGATGGTGGACAA
TTTACATGTAGCTACACCACAGGGAGGAAATATATCTCCCCATAACTATT
TACAGCGTGTATATCTAGAGAAGGGTGTGACCTCATGAAAAACACTTAAT
TGGTTCTCATGAGGAACCATTAACTCCCTCTTGGAGAGGGGTGGGGACTT
ACTCTTCTTCTCCCCTGTATCCCTTAACTGTCTGTAAAGATCTGGGGAGG
GGTAATGCTTTGTGAGCTTTCCCACAAGACATCTGAAGACAGAAAAGCCC
AGCCTTGT

Query= MSMg01no543_j14.g1 MSMg01no543_j14.g1 CHROMAT_FILE:
MSMg01no543_j14.g1 PHD_FILE: MSMg01no543_j14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:24:01 2005
         (658 letters)



>mm_chrX_5528786_5529844
          Length = 1059

 Score = 1236 bits (639), Expect = 0.0
 Identities = 654/659 (99%), Gaps = 1/659 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   agggttcctaagatcttccctctccatactgtcatgtaactatttcaggttattagtttg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 859 agggttcctaagatcttccctctccatactgtcatgtaactatttcaggttattagtttg 800

                                                                       
Query: 61  tttttcaaaagaagtcttgtgcctttgggtccctgacgatctcatcttggaggaagaaca 120
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 799 tttttcaaaagaagtcttgtgcctttgggtccctgaagatctcatcttggaggaagaaca 740

                                                                       
Query: 121 agattatatgatgatgctactatcaggaccatttcagggatacatgcacttaagatgaaa 180
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 739 agattatatgatgatgctactatcagaaccatttcagggatacatgcacttaagatgaaa 680

                                                                       
Query: 181 cctgcaatttattagctagtctaagaatgggggcctcaca-ggtgatgtgatgtgtcagc 239
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 679 cctgcaatttattagctagtctaagaatgggggcctcacagggtgatgtgatgtgtcagc 620

                                                                       
Query: 240 gatgtactgctagcaggctgaagcagaaagattgcttgagcctgaaacctgttttgtgtg 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 gatgtactgctagcaggctgaagcagaaagattgcttgagcctgaaacctgttttgtgtg 560

                                                                       
Query: 300 agcttttcctagtcagaagaacaaatatgtattcagcccagattgggtaccaatagcaaa 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 agcttttcctagtcagaagaacaaatatgtattcagcccagattgggtaccaatagcaaa 500

                                                                       
Query: 360 caaagaaataattatattcaggtatagattggtaactgaggttatttataggatggtgga 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 caaagaaataattatattcaggtatagattggtaactgaggttatttataggatggtgga 440

                                                                       
Query: 420 caatttacatgtagctacaccacagggaggaaatatatctccccataactatttacagcg 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 caatttacatgtagctacaccacagggaggaaatatatctccccataactatttacagcg 380

                                                                       
Query: 480 tgtatatctagagaagggtgtgacctcatgaaaaacacttaattggttctcatgaggaac 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tgtatatctagagaagggtgtgacctcatgaaaaacacttaattggttctcatgaggaac 320

                                                                       
Query: 540 cattaactccctcttggagaggggtggggacttactcttcttctcccctgtatcccttaa 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 cattaactccctcttggagaggggtggggacttactcttcttctcccctgtatcccttaa 260

                                                                      
Query: 600 ctgtctgtaaagatctggggaggggtaatgctttgtgagctttcccacaagacatctga 658
           ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 259 ctgtctgtaaagacctggggaggggtaatgctttgtgagctttcccacaatacatctga 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1059
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1049
Effective search space:   679752
Effective search space used:   679752
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)