Query= MSMg01no548_g08.b1 MSMg01no548_g08.b1 CHROMAT_FILE:
MSMg01no548_g08.b1 PHD_FILE: MSMg01no548_g08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:30:18 2005
(382 letters)
>mm_chrX_77373194_77373977
Length = 784
Score = 677 bits (350), Expect = 0.0
Identities = 371/380 (97%), Gaps = 5/380 (1%)
Strand = Plus / Plus
Query: 5 gaattcaagtcatctccccctgaaatgttcatttagaaaaaaaaaa--cacacagtaaaa 62
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 205 gaattcaagtcatctccccctgaaatgttcatttagaaaaaaaaaaaacacacagtaaaa 264
Query: 63 tgataactgtgaatatgttatgcccctaactgctgttcagagcctgagtagttcctttaa 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgataactgtgaatatgttatgcccctaactgctgttcagagcctgagtagttcctttaa 324
Query: 123 ggtgcttctactcaaataataataataataataataataataataataataataataata 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggtgcttctactcaaataataataataataataataataataataataataataataa-- 382
Query: 183 aaaccgttcttgactttccagcagaaaataattttataatcattccaagtggaagaaagg 242
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 -aaccgttcttgactttccagcagaaaataattttataatcattccaagtggaagaaagg 441
Query: 243 taatcaattttaaagttttaaaagaaataagtatagtatgttctttatgtattatggaac 302
||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||||
Sbjct: 442 taatccattttaaagttttaaaagaaataagtatagtatgttttttatgtatcatggaac 501
Query: 303 ttgaaatcaaaagaaaaaaatctaagatgcaggcttctcaggagacaaagatatcctttt 362
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 502 ttgaaatcaaaagaaaaaaatctaagatgcaggcttctcaagagacaaagatatcctttt 561
Query: 363 ttgtgtggttctgtgatctg 382
||||||||||||||||||||
Sbjct: 562 ttgtgtggttctgtgatctg 581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 13
Number of successful extensions: 13
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 1
Length of query: 382
Length of database: 784
Length adjustment: 9
Effective length of query: 373
Effective length of database: 775
Effective search space: 289075
Effective search space used: 289075
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no548_g08.g1 MSMg01no548_g08.g1 CHROMAT_FILE:
MSMg01no548_g08.g1 PHD_FILE: MSMg01no548_g08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:30:18 2005
(428 letters)
>mm_chrX_77519283_77520110
Length = 828
Score = 804 bits (416), Expect = 0.0
Identities = 426/430 (99%), Gaps = 2/430 (0%)
Strand = Plus / Minus
Query: 1 atgcatgtggttcaaatgtgtaaaacttactatctttacaatatgaaaatatttagttat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 atgcatgtggttcaaatgtgtaaaacttactatctttacaatatgaaaatatttagttat 390
Query: 61 aatagagaataccctttattttgttcacatcattatagcaagagtgtagaagctttaact 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 389 aatagagaataccctttattttgttcacatcattatagcaagagtgtaggagctttaact 330
Query: 121 cttcatttctgcaagttgtgggaggagctataattgtgctttataatctaggctgccatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 cttcatttctgcaagttgtgggaggagctataattgtgctttataatctaggctgccatg 270
Query: 181 accttgtgaaacctctgctatggatatttatttgtgacctcacatataaaagacaccaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 accttgtgaaacctctgctatggatatttatttgtgacctcacatataaaagacaccaaa 210
Query: 241 tattccttcaaatt--aaaaaaaatcatattatattatataggaccaaaacaaaaaaagt 298
|||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 209 tattccttcaaattaaaaaaaaaatcacattatattatataggaccaaaacaaaaaaagt 150
Query: 299 taaccacagttgccaaggcaatgaggtatcaagaattatttgtaagaacaattagcatta 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 taaccacagttgccaaggcaatgaggtatcaagaattatttgtaagaacaattagcatta 90
Query: 359 tgctaaatgaagacataaaaaatagacaaaatgttcacatcatttcctcagtgtgtaact 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 tgctaaatgaagacataaaaaatagacaaaatgttcacatcatttcctcagtgtgtaact 30
Query: 419 ttctaatttc 428
||||||||||
Sbjct: 29 ttctaatttc 20
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 428
Length of database: 828
Length adjustment: 9
Effective length of query: 419
Effective length of database: 819
Effective search space: 343161
Effective search space used: 343161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
