Query= MSMg01no548_k07.b1 MSMg01no548_k07.b1 CHROMAT_FILE:
MSMg01no548_k07.b1 PHD_FILE: MSMg01no548_k07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:30:37 2005
(372 letters)
>mm_chrX_56485148_56485919
Length = 772
Score = 652 bits (337), Expect = 0.0
Identities = 358/365 (98%), Gaps = 2/365 (0%)
Strand = Plus / Plus
Query: 5 gaattccacaacctgttctgaaatagagactaagggctgattctgggagtatcccagggt 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccacaacctgttatgaaatagagactaagggctgattctgggagtatcccagggt 264
Query: 65 atgagtggtaagaagagctatgggaaagaagatgatggtatttgatttgagcaatgcttt 124
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 265 atgagtggtaagaagagctatgggaaagaagatgatgggatttgatttgagcaatgcttt 324
Query: 125 tacaagttttatatttgactaagttctgctgtatttttt-gtatacaataaaaggtaaaa 183
||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 325 tacaagttttatatttgactaagttctgctgtatttttttgtatacaatgaaaggtaaaa 384
Query: 184 tgaaaaaagcaagtgtaaagaaaaaacattaacacggagattaagatattaaatgcatcg 243
||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 385 tgaaaaa-gcaagtgtaaagaaaaaacattaatacggagattaagatgttaaatgcatcg 443
Query: 244 tgtcttctgcttatagattttaaaataaatgaagtctatatattaaggtactatttttta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tgtcttctgcttatagattttaaaataaatgaagtctatatattaaggtactatttttta 503
Query: 304 ttaacagcagattcccaagtatagtgttttactggttttgcatagtggatactatataat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ttaacagcagattcccaagtatagtgttttactggttttgcatagtggatactatataat 563
Query: 364 atttt 368
|||||
Sbjct: 564 atttt 568
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 772
Length adjustment: 9
Effective length of query: 363
Effective length of database: 763
Effective search space: 276969
Effective search space used: 276969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no548_k07.g1 MSMg01no548_k07.g1 CHROMAT_FILE:
MSMg01no548_k07.g1 PHD_FILE: MSMg01no548_k07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:30:37 2005
(456 letters)
>mm_chrX_56646460_56647315
Length = 856
Score = 874 bits (452), Expect = 0.0
Identities = 455/456 (99%)
Strand = Plus / Minus
Query: 1 tggcctgttacgcttcattgagcccttacaaatcatctatgatatggaacagatagatac 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 tggcctgtttcgcttcattgagcccttacaaatcatctatgatatggaacagatagatac 597
Query: 61 gctgtattttaaaaagatttttatctattcacatctaccagaattattttatatttactt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 gctgtattttaaaaagatttttatctattcacatctaccagaattattttatatttactt 537
Query: 121 ctagttgcacaaatttacacaagagttttggtgcaatctggaaaaaattaatagtctatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 ctagttgcacaaatttacacaagagttttggtgcaatctggaaaaaattaatagtctatg 477
Query: 181 tatctcatgatcaattttgctcaaattgttcagtaacaaatggaacatagaaaccatggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 tatctcatgatcaattttgctcaaattgttcagtaacaaatggaacatagaaaccatggc 417
Query: 241 gacacaccatagagttcatttttaaaagaagctattgtctatttgtctctaatatgaacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 gacacaccatagagttcatttttaaaagaagctattgtctatttgtctctaatatgaacc 357
Query: 301 atcctgaagtaatgccacgcaaagtaaagtcgcctgaatgagatttccctgagatactct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 atcctgaagtaatgccacgcaaagtaaagtcgcctgaatgagatttccctgagatactct 297
Query: 361 gtatgctcagagatcatccaataagaattcatgtaatatatcttggaggatatcccagaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 gtatgctcagagatcatccaataagaattcatgtaatatatcttggaggatatcccagaa 237
Query: 421 taacctgtcccattcaaaggtttagtttgtgagata 456
||||||||||||||||||||||||||||||||||||
Sbjct: 236 taacctgtcccattcaaaggtttagtttgtgagata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 856
Length adjustment: 10
Effective length of query: 446
Effective length of database: 846
Effective search space: 377316
Effective search space used: 377316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
