BAC Information

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BAC

Clone NameB6Ng01-006F05
ChromosomeY (Build37)
Map Location 573,331 - 573,552
singlet/doubletsinglet
Overlap geneUty
Upstream geneLOC100039202, Zfy1, Ube1y1, Rhoay-ps3, Jarid1d, Eif2s3y, Tspy-ps
Downstream geneDdx3y, LOC100042763, LOC385246, Usp9y, LOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-006F05.bB6Ng01-006F05.g
ACCDH843219DH843220
length1,069428
definitionDH843219|Mus musculus domesticus DNA, BAC clone: B6Ng01-006F05, 5' end.DH843220|Mus musculus domesticus DNA, BAC clone: B6Ng01-006F05, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccacctcagatgaagtatccattgcttttactttttacacgttac
tgtatgtaataaagcagctggatatatactcttggatctgactttttcat
gccatttgctcgccagccatccatattgttgcatataattatacataatt
cagtttcattgtgtatattttattgctcaaatatgatacagtggactgaa
ccaatctactgttaatgaacacttaggaaatgtctatttcattgtaattg
tgaggtgacttttataaccagtcattttgagttatcatacagacatatca
ctattgaatttattcccagatatagtttggctaaatcatagagtaaatat
atattcatcataggatcttctctcaaacttgtgtccaaagtgattatttc
agttcactccctgccatcagtacttgtatgtcctgcttgcttctcatctt
cattgatataaccattctgttattattttttcagtcttttttattttaga
cgttggtttgtcttatgacaagtgaaattctgttcatgaaaatggagttt
ccatggtgtcaataccctccaaagccccacttccttttttttttttccct
tagatgttttcttcatttacatttcaaaagttatcacctttcctagtttc
ctctccaaaaatcttctatatgctccgcgcccctctccctctgatcccca
acccacccactcccacttcctggccctggtattcccccatactggggcat
agaatcttcgcaagaccaagggcctctcctcccattgatggccaactagg
ccatcctctgttgaatatgcagcttgagacatgagctctggttagttcat
attgttgttcctcctatagggctgcagacccctttagctccttgggtact
ttatctagctcttcattggggaccctgtgttccctccatagatgactgtc
agcattcacttctgtattggcaggcactggcatagctcacaggagacagc
tctatcagggtcctgtcagcaaaactttgttggtatatgcaatagtggtc
tggggttgggggtgtttat
tttgtttgtctctgagccccatttttaatggggttatttgattttctgga
gtccaccttcttgagttctttatatatattggatattagtcccctatctg
atttaagattggtaaagattctttcccaatctgttggtggcctttttgtc
ttattgaaggtgtcttttgccttacagaaactttgtaattttatgaagtc
ccatttagagaaagtacccaaggagctaaaggagtctgcaaccttatagg
tggaacaacaatatgaactaaccagtacccccagagctcttgtctctagc
tgcatatgtatcagaagatggcctagccggccatcattgggaagagaggc
cccttggtcttgcaaactttatatgcctcagtacgggggaatgccagggc
caagaagtgggagtgggtggggagggca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_573331_573552
seq2: B6Ng01-006F05.g_278_500

seq1  TAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAAACCTATAGATGGAA  50
      |||||||||||||||||||||||||||  ||||||| | ||||| |||||
seq2  TAGAGAAAGTACCCAAGGAGCTAAAGGAGTCTGCAACCTTATAGGTGGAA  50

seq1  CAACAATATGAA-TAACCAGTATCCACAGAGCTCATGTCTCTAGCTGCAT  99
      |||||||||||| ||||||||| || |||||||| |||||||||||||||
seq2  CAACAATATGAACTAACCAGTACCCCCAGAGCTCTTGTCTCTAGCTGCAT  100

seq1  ATGTATCAGAAGATGGCCTAGTTGGCCATCATTGGGAAGAGAGGCCCCTT  149
      |||||||||||||||||||||  |||||||||||||||||||||||||||
seq2  ATGTATCAGAAGATGGCCTAGCCGGCCATCATTGGGAAGAGAGGCCCCTT  150

seq1  GGTCTTGCAAACTTTATATGCCCCAGTACAGGGGAACACCAGGGCCAAGA  199
      |||||||||||||||||||||| |||||| ||||||  ||||||||||||
seq2  GGTCTTGCAAACTTTATATGCCTCAGTACGGGGGAATGCCAGGGCCAAGA  200

seq1  AGTGGGAGAAGGTGGGTAGGGTA  222
      ||||||||  |||||| |||| |
seq2  AGTGGGAGTGGGTGGGGAGGGCA  223