BAC Information

Click to search

BAC

Clone NameB6Ng01-006P15
ChromosomeX (Build37)Y (Build37)
Map Location 18,281,986 - 18,283,130573,469 - 573,537
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG436196, EG331391, Dusp21, LOC100043951, Utx, LOC100043952, 4930578C19Rik
Downstream geneLOC100043098, EG628855, LOC385333, EG628871, LOC100043953, BC049702
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-006P15.bB6Ng01-006P15.g
ACCDH843685DH843686
length1,135388
definitionDH843685|Mus musculus domesticus DNA, BAC clone: B6Ng01-006P15, 5' end.DH843686|Mus musculus domesticus DNA, BAC clone: B6Ng01-006P15, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,281,986 - 18,283,130)(573,469 - 573,537)
sequence
gaattctttatatatattggatattagccctctattggatgtagagttgg
ttaagatcttttcccaatctgtaggttgctgttttaccctactggcagtt
ccctttgccttaatatttcagctttctatctttgaatataaaaagcctta
acactgccaacaaggatcttttagctaggttccttctttctgtgtcccaa
taaatatgcaaagaaggctagtctgatgttagtcatgtcttttctaacca
aatgtttctgggcatcttgttctctctgtcaggaatacacttcccctcct
ttccttgaacccttactcatgagtcaaatgtcagggcattcttttacagg
gaagctatccttgatgactccccttcctgtgctactgtcccaagctacat
agtctttgtttaatttatttcaattacctaatgttagaaaaattagcatt
tgccccaattacaatttcagtcatcatataattatgatcaatccaataat
cctgcactcaacttaccggcttcatatgtttacttgaagctgagttcagt
gcatatcacctaagaagcagtccacaaaacatgtactaagtggataaaac
caatcaactgtccagtatagggtatattaagcagtcatggaatagattgt
actaattatcatgactgaaatgtgaggaatgtttctaccctgagaagggc
tagcagctgtgataaatgggcctcataaaagctttgagagatgcttatga
tttatgaaacaaaattggcatctcatttgccttaggtctacaagctaaac
tgggtagtgttggctatgtgtcaaagacatgatgaagtgatttagcttga
agtacatttttgagtaagaggaggagaagaaagtagatattttccataaa
atttatagtatggaatgggaagaaattagaagaaaaaaggtaagaataaa
gaaaaggaaagtatattcactgaaatcataggaggggtaatagtttaaat
ctttctctagtggtgttactaatatcaataacaacatcatctgtaaataa
ttaaggctctcttgatctatctttctcttccctccctcctccccgtatac
atacatacaaaatctctggtatttcgatatataaa
tgtcctaaaatcctatctcatgaagataacagagtcttttaaagaggata
tcaataactcactgaaagaaatacaggcaaataggtgaaggaattgaata
aaggaatccaagacccaaaagtagaagtagaaacaataaagaaaacacaa
atgggggcaaacctggaaatggaaaacctaggaaagaggtcaagaattgc
agatctaagtattaccaacagaattcaagagatagaagaatgaatctcag
gtgtagaagatatagtagaagaggtttacacaactgtcaaagaaaattga
aaatataaaaaactactaaccagaggccttggtcttgccaagattatatg
ccccagtacaggggaatgccagggccaggaagtgggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_18281986_18283130
seq2: B6Ng01-006P15.b_47_1181

seq1  GAATTCTTTATATATATTGGATATTAGCCCTCTATTGGATGTAGAGTTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTATATATATTGGATATTAGCCCTCTATTGGATGTAGAGTTGG  50

seq1  TTAAGATCTTTTCCCAATCTGTAGGTTGCTGTTTTACCCTACTGGCAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGATCTTTTCCCAATCTGTAGGTTGCTGTTTTACCCTACTGGCAGTT  100

seq1  CCCTTTGCCTTAATATTTCAGCTTTCTATCTTTGAATATAAAAAGCCTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTGCCTTAATATTTCAGCTTTCTATCTTTGAATATAAAAAGCCTTA  150

seq1  ACACTGCCAACAAGGATCTTTTAGCTAGGTTCCTTCTTTCTGTGTCCCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGCCAACAAGGATCTTTTAGCTAGGTTCCTTCTTTCTGTGTCCCAA  200

seq1  TAAATATGCAAAGAAGGCTAGTCTGATGTTAGTCATGTCTTTTCTAACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATGCAAAGAAGGCTAGTCTGATGTTAGTCATGTCTTTTCTAACCA  250

seq1  AATGTTTCTGGGCATCTTGTTCTCTCTGTCAGGAATACACTTCCCCTCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTTCTGGGCATCTTGTTCTCTCTGTCAGGAATACACTTCCCCTCCT  300

seq1  TTCCTTGAACCCTTACTCATGAGTCAAATGTCAGGGCATTCTTTTACAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTGAACCCTTACTCATGAGTCAAATGTCAGGGCATTCTTTTACAGG  350

seq1  GAAGCTATCCTTGATGACTCCCCTTCCTGTGCTACTGTCCCAAGCTACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTATCCTTGATGACTCCCCTTCCTGTGCTACTGTCCCAAGCTACAT  400

seq1  AGTCTTTGTTTAATTTATTTCAATTACCTAATGTTAGAAAAATTAGCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTTGTTTAATTTATTTCAATTACCTAATGTTAGAAAAATTAGCATT  450

seq1  TGCCCCAATTACAATTTCAGTCATCATATAATTATGATCAATCCAATAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCAATTACAATTTCAGTCATCATATAATTATGATCAATCCAATAAT  500

seq1  CCTGCACTCAACTTACCGGCTTCATATGTTTACTTGAAGCTGAGTTCAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCACTCAACTTACCGGCTTCATATGTTTACTTGAAGCTGAGTTCAGT  550

seq1  GCATATCACCTAAGAAGCAGTCCACAAAACATGTACTAAGTGGATAAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATCACCTAAGAAGCAGTCCACAAAACATGTACTAAGTGGATAAAAC  600

seq1  CAATCAACTGTCCAGTATAGGGTATATTAAGCAGTCATGGAATAGATTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCAACTGTCCAGTATAGGGTATATTAAGCAGTCATGGAATAGATTGT  650

seq1  ACTAATTATCATGACTGAAATGTGAGGAATGTTTCTACCCTGAGAAGGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATTATCATGACTGAAATGTGAGGAATGTTTCTACCCTGAGAAGGGC  700

seq1  TAGCAGCTGTGATAAATGGGCCTCATAAAAGCTTTGAGAGATGCTTATGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGCTGTGATAAATGGGCCTCATAAAAGCTTTGAGAGATGCTTATGA  750

seq1  TTTATGAAACAAAATTGGCATCTCATTTGCCTTAGGTCTACAAGCTAAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGAAACAAAATTGGCATCTCATTTGCCTTAGGTCTACAAGCTAAAC  800

seq1  TGGGTAGTGTTGGCTATGTGTCAAAGACATGATGAAGTGATTTAGCTTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTAGTGTTGGCTATGTGTCAAAGACATGATGAAGTGATTTAGCTTGA  850

seq1  AGTACATTTTTGAGTAAGAGGAGGAGAAGAAAGTAGATATTTTCCATAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACATTTTTGAGTAAGAGGAGGAGAAGAAAGTAGATATTTTCCATAAA  900

seq1  ATTTATAGTATGGAATGGGAAGAAATTAGAAGAAAAAAAGGTAAGAATAA  950
      |||||||||||||||||||||||||||||||| ||||||||||||||| |
seq2  ATTTATAGTATGGAATGGGAAGAAATTAGAAG-AAAAAAGGTAAGAAT-A  948

seq1  AAGAAAAGGAAAGTATATTCACTGAAAATCATAGGGAGGGGT-ATAGTTT  999
      |||||||||||||||||||||||| |||||||| |||||||| |||||||
seq2  AAGAAAAGGAAAGTATATTCACTG-AAATCATA-GGAGGGGTAATAGTTT  996

seq1  AAATCTTTCTCTAGTGGTTGTTACT-ATATCAATTACAACATTCATCTGT  1048
      ||||||||||||||||| ||||||| |||||||| |||||| ||||||||
seq2  AAATCTTTCTCTAGTGG-TGTTACTAATATCAATAACAACA-TCATCTGT  1044

seq1  AAATTAATTAATGTCTCTCTTGATCTATCTTTCTCTTCCCCTCCCTCTCC  1098
      ||| ||||||| | ||||||||||||||||||||||| |||||||||  |
seq2  AAA-TAATTAA-GGCTCTCTTGATCTATCTTTCTCTT-CCCTCCCTCCTC  1091

seq1  CCCATATATACTATACATAC-AAATCTCT-GTATATTCGTATATATAAA  1145
      ||| ||||    |||||||| |||||||| |||| |||| |||||||||
seq2  CCCGTATA---CATACATACAAAATCTCTGGTAT-TTCG-ATATATAAA  1135

seq1: chrY_573469_573537
seq2: B6Ng01-006P15.g_395_461

seq1  AGAGGCCCCTTGGTCTTGCAAACTTTATATGCCCCAGTACAGGGGAACAC  50
      |||||  |||||||||||| ||  |||||||||||||||||||||||  |
seq2  AGAGG--CCTTGGTCTTGCCAAGATTATATGCCCCAGTACAGGGGAATGC  48

seq1  CAGGGCCAAGAAGTGGGAG  69
      |||||||| ||||||||||
seq2  CAGGGCCAGGAAGTGGGAG  67