BAC Information

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BAC

Clone NameB6Ng01-026O20
ChromosomeY (Build37)
Map Location 1,258,313 - 1,258,886
singlet/doubletsinglet
Overlap genenone
Upstream geneJarid1d, Eif2s3y, Tspy-ps, Uty, Ddx3y, LOC100042763, LOC385246, Usp9y, LOC100039278, EG667079
Downstream geneLOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2, LOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210, Ube1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874, LOC667194, LOC100042881, LOC667201, LOC100039546
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-026O20.bB6Ng01-026O20.g
ACCDH857815DH857816
length675568
definitionDH857815|Mus musculus domesticus DNA, BAC clone: B6Ng01-026O20, 5' end.DH857816|Mus musculus domesticus DNA, BAC clone: B6Ng01-026O20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgttagctttgtaccccatttttaaataggattatttggttc
tctggagtctaacttcttgggttcttggtatatattggatgttagccctc
tatcagatgtatgattggcaaagatcttttcccagtctgttggttgccat
tttgtcctattgacagtgtcctttgccttagagaagctttgcaattttat
gaggtctcttttgtctattgttgatttgagagcatagccattggtgttca
ggaaattttcccctagtccatgtgtttgaggctcttttccactttctctt
ctattagtttcagtgtgtctggtttatgtggaggtccttgatgcacttgg
acatgagctttgtacaaggagataagatcaatttgcattcttctatgagc
catcaccatttgttgagtatgttgttgttgttgttgttgttgtttttgtt
tttgttttcttcctccactggatggttttagctccttttcaaagatcaag
tgaccataggtgtgtgggtttaattctgggtcttcaattctattccattt
attgacctgtctctgtaccgataccatggtgtttttatcatattgctctg
tagtacagcttgtaaccagggatggcaattccccaaaagtttctttttgt
tattgagaatagttgttgctatcct
cttgtaatcagaaggaaattttaaagatatttaaaatattactggttgat
atcatgtttaagtttatctcaactttgtaaccttgggcccaagtgcaaat
tttccttactccttgcaaagaattcattttcaggtcatcaggccatttcg
gtagggattttatttcggccttttatgaggccatatgaggaggtaaagcc
tagatgccgaatgtttctgagtgtaactagggaagtaaccaacctgatag
gggttctattatgtaagctgagctagggtgatgtcacagagcactggccg
gaggttgtgcacctattccacttgcgggcgctagaatcccttgaagttgg
gttaactatctttacagtggtgtgtgaaagccaggtcaacaggcttttgg
tgcctggcctgtttcagaagacagaatctggacgactaggatatattttt
tgggtaagtacatttatgaaataactgggaccctcttagctccagaaagc
taaaagtattctctcagtaactttacattttaatttctcccatgtttggg
agttagggggatggatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_1258313_1258886
seq2: B6Ng01-026O20.g_67_640

seq1  GAATTCCTTGTAATCAGAAGGAAATTTTAAAGATATTTAAAATATTACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGTAATCAGAAGGAAATTTTAAAGATATTTAAAATATTACTG  50

seq1  GTTGATATCATGTTTAAGTTTATCTCAACTTTGTAACCTTGGGCCCAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGATATCATGTTTAAGTTTATCTCAACTTTGTAACCTTGGGCCCAAGT  100

seq1  GCAAATTTTCCTTACTCCTTGCAAAGAATTCATTTTCAGGTCATCAGGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATTTTCCTTACTCCTTGCAAAGAATTCATTTTCAGGTCATCAGGCC  150

seq1  ATTTCGGTAGGGATTTTATTTCGGCCTTTTATGAGGCCATATGAGGAGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCGGTAGGGATTTTATTTCGGCCTTTTATGAGGCCATATGAGGAGGT  200

seq1  AAAGCCTAGATGCCGAATGTTTCTGAGTGTAACTAGGGAAGTAACCAACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCTAGATGCCGAATGTTTCTGAGTGTAACTAGGGAAGTAACCAACC  250

seq1  TGATAGGGGTTCTATTATGTAAGCTGAGCTAGGGTGATGTCACAGAGCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGGGGTTCTATTATGTAAGCTGAGCTAGGGTGATGTCACAGAGCAC  300

seq1  TGGCCGGAGGTTGTGCACCTATTCCACTTGCGGGCGCTAGAATCCCTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCGGAGGTTGTGCACCTATTCCACTTGCGGGCGCTAGAATCCCTTGA  350

seq1  AGTTGGGTTAACTATCTTTACAGTGGTGTGTGAAAGCCAGGTCAACAGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGGTTAACTATCTTTACAGTGGTGTGTGAAAGCCAGGTCAACAGGC  400

seq1  TTTTGGTGCCTGGCCTGTTTCAGAAGACAGAATCTGGACGACTAGGATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGTGCCTGGCCTGTTTCAGAAGACAGAATCTGGACGACTAGGATAT  450

seq1  ATTTTTTGGGTAAGTACATTTATGAAATAACTGGGACCCTCTTAGCTCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTGGGTAAGTACATTTATGAAATAACTGGGACCCTCTTAGCTCCA  500

seq1  GAAAGCTAAAAGTATTCTCTCAGTAACTTTACATTTTAATTTCTCCCATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCTAAAAGTATTCTCTCAGTAACTTTACATTTTAATTTCTCCCATG  550

seq1  TTTGGGAGTTAGGGGGATGGATGG  574
      ||||||||||||||||||||||||
seq2  TTTGGGAGTTAGGGGGATGGATGG  574