BAC Information

Click to search

BAC

Clone NameB6Ng01-030O07
ChromosomeY (Build37)
Map Location 1,120,566 - 1,120,765
singlet/doubletsinglet
Overlap genenone
Upstream geneZfy1, Ube1y1, Rhoay-ps3, Jarid1d, Eif2s3y, Tspy-ps, Uty, Ddx3y, LOC100042763, LOC385246, Usp9y, LOC100039278
Downstream geneEG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2, LOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210, Ube1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-030O07.bB6Ng01-030O07.g
ACCDH860663DH860664
length9301,216
definitionDH860663|Mus musculus domesticus DNA, BAC clone: B6Ng01-030O07, 5' end.DH860664|Mus musculus domesticus DNA, BAC clone: B6Ng01-030O07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtttagctctgagctccattttaatgggattatttgatttt
ctggagtccaccttcttgagttctttttatgcattggatattagtcccct
atctgatttaggctaggtaaagatcctttcccaatctgttggtggccttt
ttgcctcattgacgttgtcttttgccttgcagacgctttgcaactttatg
aggttccatttatcgattctcggtcttacagcacaagccattgctgttct
attcaggaatttttcccctgtacccacatcttcgaggctttttcctactt
tcttttttttttttttttgatttttttttccattttttattaggtattta
gctcatttacatttccaatgctataccaaaagtcccccatagtcacccac
ccacactcccctacccatctgctccccctttttggccctggcattcccct
gtactgggacatataaagtttgcgtgtccaatgggcctctctttccagtg
atggccgactaggccatcttttgatacatatgcagctagagtcaagagct
ccggggtactggttagttcataatgttgttccacttatagggttgcagat
ccctttagctccttgggtactatctctagctcctccgttgggggccctgt
gatccatccaatagctgactgtgatcatccacttctgggtttgctaggcc
ccggcatagtctcacaagtgacagctacatctgggtcctttcaataaaat
cttgctagtgtatgcaatggtgtcagcgtttggatgctgattatggggcg
gatccctggatatggcagtctctacatggtccatcctttcatctcagctc
caaactttgtctctataactcttccaaggtgtttgtatcacttctacgag
gtcattatgtcacacttcagtcttcatttt
gaattccaatgtgtgctttgagctttagtaaagtttcttttgtgaatgtg
ggtgactgagcatgtggagcatagatgttcagaattgagagttcatcttg
ttagatttttcctttaatgagtatgaagtattcttccttgtcttttttat
aacttttggttgaaagtctattttattcaatattagaatggctatccctg
tttgtttgttggaaccatttgcttgagaaattgttttccaaacttttact
ctgagttagtatctgtctttgtcactgagttgtgtttcctgcatgtagca
aatgttgggtcctggttacatatctagtcttttattctttgtctgtttat
tggggaattgagtccattgacgttaagagatactaagaaaaagtgattgt
tgctaactgttattaagctttttcttatatggatatggcaataaaaactg
ccagtcttcgtttgtttctgagataataggtagatatttacagattagaa
cttatctcaagattttttataaaatattaagcaaagtcataaaatggaac
aaaatatttgttgtaggttcaaggacagatgacaaaatattgattgggtt
tatctatgcaaatcttcaataataactttgttatggtctttaactctcca
tgaactcatagagctagtgaatgtctacccttaataggaacatatgtaaa
tattcttggttgtaaatttcttcatcaatttatgtttgaattttgtttgt
acttttagtgaatttctctaaataaaagatgcttggccaggcggtggtgg
tacaagtctttcatcccagcactttggaggcagaggcaggtggatttctg
agtttgagccagcctggtctacaaagtgagttccaggacagccagggcta
tgtaaagaaaccctgtctcaaacaacaaacaacaacaacaaacaacaaga
tggttgaaaaacaacatgatctagtcccaagaaagataaaagaaaaagca
gatgattatattacatttatttatacatagagcatgatggccaaacgtga
gggaggaatgcaaaattactgattaaatggtgcctaaaataaaaaaatga
ctgcactctaaggcagcaagtccctggaccgtggcgtgcaatcctggagc
gagccccaggtaccccttgtcctcgcaactgccctagaccgataaccatg
gcccacttgaagtgag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_1120566_1120765
seq2: B6Ng01-030O07.b_343_542

seq1  TCTTTTTTTTTTTTTTTTAATTTTTTTTTCCATTTTTTATTAGGTATTTA  50
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TCTTTTTTTTTTTTTTTTGATTTTTTTTTCCATTTTTTATTAGGTATTTA  50

seq1  ACTCATTTACATTTCCAATGCTATACCAAAAGTCCCCCATATCCACCCAC  100
       ||||||||||||||||||||||||||||||||||||||||  |||||||
seq2  GCTCATTTACATTTCCAATGCTATACCAAAAGTCCCCCATAGTCACCCAC  100

seq1  CCCCACTCCCCTGCCCACCCACTCCCCCTTTTTGGCCCTGGTATTCCCCT  150
      || ||||||||| |||| |  |||||||||||||||||||| ||||||||
seq2  CCACACTCCCCTACCCATCTGCTCCCCCTTTTTGGCCCTGGCATTCCCCT  150

seq1  GTACTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTCCAGTG  200
      |||||||| ||||||||||||||  |||||||||||||||||||||||||
seq2  GTACTGGGACATATAAAGTTTGCGTGTCCAATGGGCCTCTCTTTCCAGTG  200